Polyodon spathula (Mississippi paddlefish): 121317547
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Entry
121317547 CDS
T07273
Name
(RefSeq) probable E3 ubiquitin-protein ligase RNF144A-A
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121317547
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121317547
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121317547
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
zf-RING_2
MglA_C
Motif
Other DBs
NCBI-GeneID:
121317547
NCBI-ProteinID:
XP_041109542
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All DBs
Position
6:complement(69845810..69872515)
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AA seq
293 aa
AA seq
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MTTARYRPTWDLALDPLMSCKLCLGEFPLEQMTTITQCQCIFCTLCLKQYVELLIREGLE
VAISCPDAACPQHGHLQENEIECMVEEDILQRYKKLQFEREVLLDPCRTWCPSSSCQAVC
QLNEMEPPALQLVQCTACNLEFCSACKANWHPEQVCQENVPVTSFLPGETSSSYKSDEDD
APIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLGSLDDDFLLIHYDKGPCRNKLGHS
RASVIWHRTQVVGIFAGFGLLLLVASPFLLLATPFVLCCKCKCSKGDDDPLPT
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgactacagcaagatataggcctacttgggatttggcgctggaccccctaatgtcctgt
aaactgtgccttggagaatttccgttggagcagatgacaacaataacccagtgtcaatgc
atcttctgtacactgtgcctaaaacagtatgtggaactcctgatcagagagggcctggaa
gtggctattagctgtcccgatgctgcctgtccgcaacacggtcatttacaagaaaacgag
attgagtgcatggtggaagaagacattttgcaaagatataagaagttacagtttgaacga
gaggttctgttggatccttgtcggacctggtgcccgtcctcctcctgtcaagccgtgtgt
cagctgaatgaaatggagccccctgccttgcagctggtccagtgcacagcctgtaacctg
gagttctgctctgcctgcaaagcaaactggcaccctgagcaggtctgccaagagaatgtg
cctgtgacatcattccttccaggagaaacaagttcatcctataagagtgatgaagatgat
gctccgatcaagaggtgtccgaagtgcaaagtctatatcgaacgtgatgaaggctgcgcc
caaatgatgtgcaaaaactgtaaacatgccttctgctggtactgcctggggtctctggat
gatgatttcctattgatacattatgacaaaggaccttgtcgcaacaaacttggacactcc
agggcatctgtaatctggcacagaacacaagtggttggtatttttgctgggtttggtctg
ttgctgttggtggcctctcccttcctccttctggccactccatttgtcttgtgctgcaaa
tgcaaatgcagcaagggtgatgacgacccactgcctacctag
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