Polyodon spathula (Mississippi paddlefish): 121317553
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Entry
121317553 CDS
T07273
Name
(RefSeq) EARP-interacting protein homolog
KO
K23289
EARP and GARP complex-interacting protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121317553
Membrane trafficking [BR:
pspa04131
]
Protein recycling
Others
Others
121317553
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EIPR1
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
121317553
NCBI-ProteinID:
XP_041109550
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Position
6:70565659..70584316
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AA seq
386 aa
AA seq
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MEDDAPVIYGLEFQARALTAQTAETESIRFLVGTQSLKYDNQIHIVDFDDENKIINKNVL
LHQVGEIWHISASPADKSVLTTCYSKTSDNKVITCAAMWRMPKESESGNHESPDDSSSNP
QALELLCHLDNTAHGNIACVLWEPMGDGKRLISLADNHVQLWDLQESSSKAVISSSATLE
GKGQLKLTSGRWSPHHNCTQVVTANDTAIRGWDIRSMRQIYCIENAHGQLVRDLDFNPNK
QYYLASCGDDCKVKFWDVRNINEPVKSLEEHSHWVWSVRYNNSHDQLVLTGSSDSRVILS
NMVSISSEPFGHLVDEDELSDQEDNHQDKRKEPLQDSIIATYEEHEDSVYAVEWSSADPW
LFASLGYDGRLVINRVPRALKYQILL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgatgcgcctgttatatatggtcttgaattccaggcacgtgctttgacagcc
caaactgcagagacagagtccatacggtttcttgttggcacacaatctctcaaatacgac
aatcagatacacattgttgactttgatgatgaaaataagatcattaataagaatgtgctt
ctgcaccaagttggagagatatggcacatcagtgcaagtcctgcagataaaagtgtgctg
acaacatgttacagtaaaacttcagacaataaagtgataacatgtgcagctatgtggagg
atgccgaaggaatcggaatcaggcaatcatgaatcccctgatgattcatcaagcaaccct
caggccttagagctgctctgtcaccttgacaacacagcccatggcaatatagcttgtgtt
ctctgggagcccatgggtgatggcaaaagactgatttcacttgcagataatcatgtacag
ctatgggacttgcaggaaagttccagcaaggcagtgatttccagctctgcaacacttgaa
ggaaaggggcagttaaaattgacatctggccgatggagtccccatcacaactgcacgcag
gttgtgactgccaacgacacggccatacgaggctgggacatcaggagcatgagacagata
tactgtatagaaaatgcacacggccaactggtaagagacctggacttcaacccaaacaag
cagtactatctggccagttgtggagatgactgcaaggtcaagttctgggatgtcaggaac
atcaatgaacctgtcaagagcctggaagagcactcccattgggtgtggagtgtgaggtac
aataactctcatgatcagctggtgctgacaggcagcagtgatagcagagtcatcctctct
aacatggtgtccatctcttcagagccctttggtcatctagtggatgaagatgagctgagt
gaccaagaagacaatcaccaggataagaggaaagagccacttcaggatagcataattgcc
acctatgaagaacatgaggacagcgtgtatgctgtggagtggtcatctgcagacccttgg
ctctttgcatctttaggttatgatggaagacttgtgataaacagagtgccaagggcactg
aaataccaaatcttgttataa
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