Polyodon spathula (Mississippi paddlefish): 121317566
Help
Entry
121317566 CDS
T07273
Name
(RefSeq) solute carrier family 22 member 16-like
KO
K08212
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 16
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121317566
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
121317566
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
121317566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
121317566
NCBI-ProteinID:
XP_041109576
LinkDB
All DBs
Position
6:71180367..71197674
Genome browser
AA seq
567 aa
AA seq
DB search
MKSVERFFDELGHFKRFQAWVYFAAVFQAISCGIHYLASVFLAETPKFVCSAPGNITASM
IANYSGSGLEDIWSQWNPGQGFVLVEMESGELWELNTCSRSRRTDSFHFDYSFSGNKSEF
PCSEGFVYDRTNIQQSIVTDWNLVCDKEWLAKLTQPSFMFGVLIGALIFGDIADRVGRRT
VMMFTSTCQFVFGIAVAFTANYYVFIVIRFMLAMVSSGYLVVVFVYVTEFTGIRVRTWTS
MHVHAAFAVGVMVVAFVGYLVRVWWIYQIILSLPTFPFLLVCWKLPETPFYLLAKGRYKE
AQDLIDKVAEFNGVANPCRVSDLLKPEETDLLERDQDSAPEKKLSILDLFGTWKMAGRTI
TVWLVWFIGSLGYYVFSLGSVNLGGNQYLNLFLAGAVELPSYIVGCFAMDKLGRRNTLAP
SLILSGTACALITVVPQNIAVLAIVLSMTGKFAIAIAFGLIYLYTCELYPTVIRSLAVGS
GSMLCRVGSVVAPFCVYLASVWTFLPQVIVGVLALLIGVLTLLLPETLGKPLTSTLEEAA
ALGSKKEPKCKQANSTSGQKIEMNPKV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgtggaacgtttttttgatgagctgggtcactttaaaaggttccaggcatgg
gtgtattttgcagctgtttttcaggccatctcctgtggaattcactatttggcatcagtg
ttcctggctgagactcccaagtttgtctgcagtgcgccaggaaacatcaccgcctccatg
attgcaaattacagcggctcaggactggaagacatctggagtcagtggaacccgggacaa
ggcttcgtccttgtggagatggagagcggcgagctgtgggagcttaatacatgcagtcgg
tccaggcggacagacagttttcactttgactactcgttcagtggtaataagagcgagttc
ccctgttcagaagggttcgtctatgatcgcaccaacatccagcagagtattgtaacagac
tggaacctggtctgtgacaaggaatggctagcgaagctcacccagccctccttcatgttt
ggggtcctcatcggagcactcatatttggagacattgccgacagagtgggcaggcgtaca
gtcatgatgtttacaagcacatgtcagtttgtgtttggaattgcagttgcctttactgcc
aactattacgtcttcattgtcattcgtttcatgctggccatggtgtccagcggatacctg
gtggtagtgtttgtgtatgtgacagaattcactgggatcagagttcggacctggacctcc
atgcacgtccacgctgcctttgcggtaggggtcatggtggtggcgtttgttggatacctg
gtgcgggtctggtggatctatcagatcattctgtccctgcctacgtttcccttccttctc
gtgtgctggaagctgccagagaccccattctatctgctggctaagggcagatacaaggaa
gcccaggacctcattgataaggtggctgagttcaacggtgttgccaacccttgtagggtt
tccgacttactgaagcctgaggagacggacctgctggagcgagaccaggactcagcgcca
gagaagaagctcagcatcctggatttgtttggtacctggaaaatggctggcaggactatc
actgtgtggctggtgtggtttattggaagcttgggatactacgtgttctcactgggctct
gtcaatctgggaggaaaccagtacctaaacctgtttcttgcaggagcagtggagcttcct
tcctacatcgtcggctgctttgcaatggataaactgggaaggagaaacactctggccccg
tcccttattctcagtggaacagcctgtgcccttattaccgttgtgccgcagaacattgca
gttttggctattgttctgagcatgacagggaagtttgcgattgctatagcctttgggctc
atctacctgtacacatgcgagttgtacccaactgtcatcaggtctcttgctgttggcagt
ggtagtatgttgtgccgtgttggcagtgtagttgcacccttctgtgtgtatttagcatct
gtttggaccttcttaccacaggtgattgttggtgtcttggcactcctgattggtgtgctg
actctgctgctcccagaaaccctagggaaacccctgacaagcaccctagaggaggcagca
gcactcggatccaagaaagagcctaaatgcaaacaagcgaacagcacatcgggacagaaa
attgaaatgaatccaaaagtctga
DBGET
integrated database retrieval system
