Polyodon spathula (Mississippi paddlefish): 121317589
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Entry
121317589 CDS
T07273
Name
(RefSeq) 3'-5' exoribonuclease 1-like
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121317589
03036 Chromosome and associated proteins [BR:
pspa03036
]
121317589
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121317589
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
121317589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
DUF533
Motif
Other DBs
NCBI-GeneID:
121317589
NCBI-ProteinID:
XP_041109622
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All DBs
Position
1:complement(33693196..33703056)
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AA seq
344 aa
AA seq
DB search
MKMEEQKENIKYQDENQPKHNVQEKRETAAQGKQCCTSDENEKAPSASSKSEFSDPIYKE
IALANGHINRMSTTELSAKLAELKLETRGVKDVLKKRLKSYYKRQKLMQTMQTESSSNDT
YYKYICVVDFEATCEESNPPDYLHEIIEFPVVLINTHTLEIEDSFQEYVRPEVNSQLSDF
CVQLTGITQDTVDKADTFPNVLQRVVDWLKEKELGTKHKYAVLTDGSWDMGKFLNIQCHI
SRIRYPQFAKKWINIRKAYGNFYKVPRTQTKLTTMLGNLGMKYDGRPHCGLDDSRNIARI
AMRMLQDGCVLRVNERMHAGQLMSVSSKAPVEGAPPPHCPHSRN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggaggagcaaaaggagaatataaaatatcaagatgaaaaccaaccaaaacat
aatgttcaggagaaacgtgagacagctgctcaaggtaaacagtgctgtacatctgatgag
aatgagaaagccccctctgcctccagtaaaagcgaattcagtgatcctatttacaaagag
atcgctcttgcaaacggccacatcaacaggatgagtacaactgagctcagcgccaagctt
gcagagttaaaacttgaaaccaggggtgtgaaagatgtgttaaagaagaggctgaaaagt
tattacaagaggcagaaactgatgcagacgatgcagactgagagcagcagcaatgacacc
tattacaagtacatctgcgttgtggatttcgaagcaacgtgtgaggaaagcaatccacca
gactacctccatgagatcattgagttccctgtggtcctcatcaacactcacacactggag
attgaagattcatttcaggaatacgtcaggccagaagttaacagccagctttctgatttc
tgtgtccagcttactggaatcacacaggacacggttgataaggctgatacctttcctaat
gtgcttcagagggtagtggactggcttaaagaaaaggagctaggaacaaagcataaatat
gcagtgctgactgacggatcctgggatatgggtaaattcttaaacattcagtgtcatata
agtcgtatccggtatccacagtttgccaagaaatggataaatatacgaaaagcctacggg
aacttttacaaggtacccagaacccaaaccaagcttacgacaatgctggggaaccttggg
atgaagtatgacggtcggcctcattgcgggctagatgactcgcggaatatcgcccggatc
gccatgcgcatgctgcaggatggctgtgtgctacgtgtcaacgagaggatgcatgctggc
cagctgatgagtgtgtctagcaaagcacctgtagagggtgctcctccgccacactgtcca
cattccaggaactaa
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