Polyodon spathula (Mississippi paddlefish): 121317600
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Entry
121317600 CDS
T07273
Symbol
rngtt
Name
(RefSeq) mRNA-capping enzyme isoform X1
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121317600 (rngtt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121317600 (rngtt)
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
121317600 (rngtt)
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
121317600 (rngtt)
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
121317600 (rngtt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Tc-R-P
DNA_ligase_A_M
PTP-NADK
Y_phosphatase
SPN1_m3Gcap_bd
Y_phosphatase2
Motif
Other DBs
NCBI-GeneID:
121317600
NCBI-ProteinID:
XP_041109642
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Position
6:73475907..73553079
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AA seq
602 aa
AA seq
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MSHGGIPPRWKNCPRRGQPVAGTFLPMKTMLGPKYDDLVPAENRFHPSMLSNYLKSLKVK
MGLLVDLTNTTRFYDRNEIEQEGITYVKLQCKGHGECPSTEHTQMFIRLCEHFMEKTPTE
LMGVHCTHGFNRTGFLICAYLIEKMDWSIEAAVAAFAQARPPGIYKGDYLKELFRRYGDV
EDAPSAPPLPDWCFEDDDADDVDDEGNTIGQDSGPSSSGSLPGKRKKERLKLGAVFLEGI
QVKGVTQITTQPKLGEIQRKCQQFSEWERSGFPGAQPVSMDRQNLKFLEQKAYKVSWKAD
GTRYMMLIDGKNEVYMIDRDNSIFHIANLEFPFRKDLRAHLSNTLLDGEMIIDKVNGQPV
PRYLIYDIVKFNGQPVGQCDFNIRLICIEKEIIFPRLEKMKNGQLDKTKEPFSVRNKPFF
DIHASKKLLDGSFTSQVSHEMDGLIFQPVGKYKPGRCDDILKWKPPSLNSVDFRLKITKV
GGEGLLTQTVGLLYVGNYERPFAQMKVTKDLKQYDNKIIECTFVNNTWVFMRQRIDKSFP
NAYETAMAVCNSIQHPVTKEILLEFIDRCALPAQGQTRKHPLDPDSELMPPPPPKRPNRA
IP
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacggcggaatcccgcctagatggaagaattgtccgcgaaggggacaacctgtg
gcaggaacatttttgccgatgaagacgatgctgggtccaaaatatgatgacctggtcccg
gcggagaaccgattccaccccagcatgctctctaattatctaaagagtctcaaggtgaaa
atgggattgctagttgatttgaccaacacgacacgattttacgatcgaaatgagatcgaa
caagaaggcattacatatgtgaaacttcaatgcaaagggcatggtgaatgcccttcgaca
gaacacactcagatgtttatccggctttgtgagcacttcatggaaaagactcctaccgaa
ctgatgggtgtccactgtacacacgggttcaatcgaacaggctttctaatctgtgcctat
ctgattgagaagatggactggagtatcgaagctgctgtggctgcttttgctcaggccaga
ccaccaggaatttacaaaggagattacctgaaagagctgttccgtcgatatggtgacgtg
gaagacgccccttctgccccccctctgcctgactggtgttttgaagatgatgatgctgat
gacgtggatgatgaggggaacacgattggtcaggactcaggacccagctcttcagggtca
ttgccaggcaaaaggaaaaaggaacgactcaaactgggagctgtgttcttggaaggaatt
caagttaaaggtgtaacacaaattacaacacaaccaaagcttggtgaaatccagaggaaa
tgtcagcagttctctgaatgggaaaggtctgggttccctggagcacagccagtatccatg
gatagacagaacctaaaattcctggagcagaaggcatacaaagtcagctggaaagcagat
ggcactcggtatatgatgctgattgacgggaaaaatgaagtctatatgattgacagagac
aattcaatatttcacatagccaatttggaatttcccttccggaaagatctccgtgctcac
ctatcaaacaccctgttagatggggagatgatcattgacaaggtaaatggacaaccagtg
ccaaggtacctgatctatgacatagtgaaatttaatgggcagcctgttggtcagtgtgat
ttcaatattcgactgatttgtatagaaaaggaaatcatctttccaaggcttgagaaaatg
aagaatggacaacttgacaaaacaaaggaacctttcagcgtcagaaataaaccatttttt
gacattcatgcatcaaaaaagcttcttgatggcagctttacctctcaagtcagtcatgaa
atggatggactgatttttcagcctgtagggaaatacaaacctggcagatgtgatgatata
ttgaaatggaaacctcctagcctcaactctgtggatttccggcttaaaataacaaaagta
ggaggcgaggggttgctgacacagaccgtaggactactctatgttggcaactatgaaaga
ccttttgctcagatgaaggtgacaaaagatctgaaacagtatgacaacaaaatcattgaa
tgcacctttgtgaacaacacgtgggttttcatgcgccagagaatagacaagagcttccca
aatgcctacgaaacagccatggctgtttgcaacagcattcaacatccagttacaaaggaa
atcctgctggagttcatcgataggtgtgcactcccagctcaaggacaaacacgcaaacac
cccctggatccagactcggagctgatgccaccccctcccccaaagagaccgaaccgagct
ataccatag
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