Polyodon spathula (Mississippi paddlefish): 121317705
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Entry
121317705 CDS
T07273
Name
(RefSeq) alpha-internexin-like
KO
K07610
desmin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04519
Cadherin signaling
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121317705
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121317705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121317705
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
121317705
SSDB
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Motif
Pfam:
Filament
Filament_head
ApbA_C
Dcst2
Motif
Other DBs
NCBI-GeneID:
121317705
NCBI-ProteinID:
XP_041109793
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All DBs
Position
6:56859654..56868917
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AA seq
401 aa
AA seq
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MSTSGPKWKIKRIAFSLSTTIFVVSAHSSSSSSSQEGKLTTKMSRRSETISSYRNHFEDS
SSSSASYQMRVSSPSPSWTREARQRSASYTRSSATMCTAAHGAICLGAGMGPAMDLETAA
AANQEFLNTRTSERKEMVVLNHRLVVYIEKARTLEQQNRLLESEIGTLQNRCVKQSALQL
LYEEQFRERKKIADQVKVQREIEELMKELCNATASAGIAFSIPDLASTLKQMQAQYEDIA
AKNLQEMDDWYKTEFNDLNGTSTKHGKILQLEQDLKTTKEKITLHLREYQDLLNIKMPLD
IEIITYMKLIEGGDSRLSTMVRNTHITSGSVGPGGMGHGEVVYRAGQGFGHGHISASESI
CKEQAVEMTERKKQQLKDKVLKDTQERTITITGAGDDTDED
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagtacatcagggcccaagtggaagataaaaaggattgccttttcgctctccactaca
atttttgtggtatcagcccactcaagcagcagcagcagttcacaagaaggaaaattaacc
accaagatgagcagaagatcagaaacgatttcttcctaccgtaaccattttgaggacagc
agcagcagctctgcctcgtaccagatgagggtatccagcccctctccatcatggaccagg
gaggcccggcaacgttcggccagctacactcggagctctgccaccatgtgcactgcagca
catggggcaatctgtctgggtgctggaatggggccagctatggatctcgaaacagctgct
gccgcaaaccaggaattcctcaacacgaggaccagcgaaaggaaagagatggtcgttctg
aaccacagactagtcgtctacattgaaaaggctcgaactttggaacaacaaaatagactc
ctggaatctgagatcgggactctccagaaccgctgtgtcaaacaatcggctctgcagctg
ctctatgaagaacaattccgagagcggaagaagattgctgatcaagtgaaagtccagagg
gaaatcgaagagctaatgaaggagctatgtaacgcaactgcttctgctggtattgctttc
tccattcccgacctagcgtcaactctgaaacagatgcaagctcaatacgaagatatcgcg
gccaaaaacctacaggaaatggacgattggtataaaacagagtttaatgacctaaatggt
acttccactaagcacggaaagatactgcagctcgaacaggacctgaaaactaccaaggag
aaaattaccctccatctacgagaatatcaggatctattgaatattaaaatgcctcttgat
attgaaattatcacatacatgaaactaattgaaggtggagattcaaggctgagcaccatg
gtgagaaacacgcatataacgagtggaagtgttggacccggcggaatgggacatggcgag
gtcgtgtaccgcgctgggcaaggctttggacacgggcacatcagtgccagtgagagcatt
tgcaaagaacaggcggtggagatgactgagagaaaaaaacaacagttaaaggacaaggta
ctgaaagacacccaagagaggacaataaccattactggtgctggggatgacactgacgag
gactaa
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