Polyodon spathula (Mississippi paddlefish): 121317706
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Entry
121317706 CDS
T07273
Name
(RefSeq) PR domain zinc finger protein 13-like
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121317706
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121317706
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Paralog
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GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-BED
zf-C2H2_7th_ZNF462
zf-C2H2_15
GPS2_interact
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
121317706
NCBI-ProteinID:
XP_041109794
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All DBs
Position
6:56885025..56892204
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AA seq
622 aa
AA seq
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MQTPISICTESIIPAGLRLGPAPGIFKLGKYMTDRKEPGLKKKIRLLRGYLVDEDGRSVL
EWIGLIRAARNSQEQNLEAIADFPGGQVFYRALRDIQSGEELTVWYSFSLAQWFNIPPTA
TPTHDEKGEERYICRYCWRIFKYPNTLKSHIHFQCALINDKGFVNNEQDRNSGNDSRFQK
SGDISNISPPLRNGHNQNPTSSGHIKRIALSSPFLNKAGTTKKTTGLEDQDRALDMSVSS
ARSHGHLIGLGGTSPGLNNMCFHPGVRSAFKPARFLKLMSSEVSREDSNVKQNGLGFSKL
LGSIKTTRIMSESLAVGNPSKCSHHNDSTLSTLPCSNAIEGVKLFPHFEETTAFKHVESR
LHSGLSPPCYSQISSGLHFERFSIPQFDGVKPYSAESNIPIMPFTVYKGELVYTSPYHPL
TFHFNNLIKYPESLSYFGAPALNSALSAVTNIDREIAMHTQQLSELTVEKNRARLESVPT
TTSAPGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCFRPFGDPSNLNKHIR
LHAEGNAPYRCEFCGKVLVRRRDLERHVKSRHPGKTIKNSDDKTESTFQDQEQNNDYSND
SDVDVCFTDDHSDQESGKNTGQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacacccattagcatatgtactgagagcatcattccagccgggctaaggttaggt
ccggccccgggaatctttaaactgggaaaatacatgactgaccgtaaggagcctgggctt
aagaaaaagattcgattgctgaggggatatttggtggacgaagacgggagatccgttctg
gaatggatagggttaatccgtgctgctagaaacagccaagaacagaatctagaagccata
gcagacttccccggagggcaggttttttatagagctctgcgagatatacagtccggagag
gagttaactgtgtggtattcattctcactagctcagtggtttaacattccccctacggct
acaccaactcacgacgaaaaaggtgaagaacgctacatctgtcggtactgctggagaata
tttaaataccccaatacgttgaaatctcatatccactttcagtgcgctttaatcaatgat
aagggcttcgtgaacaacgaacaagacaggaactcgggaaatgatagcagatttcagaaa
tctggagacatttcgaacatttccccgccactacgaaacggccataaccagaacccgaca
agttcagggcatataaaacggatagcgctgtcatctccatttttaaacaaagcaggaacg
acgaaaaaaacaacggggctagaggaccaggaccgagcattagacatgagcgtcagttct
gccagaagccatgggcatctcattggcctgggtgggacttctcctggcctaaacaacatg
tgtttccaccctggagtacgatctgcttttaaaccagcgaggtttttaaagctcatgtcg
tctgaagtatccagagaagatagcaatgtaaaacagaacggactgggttttagtaaactt
ctgggaagcattaagacaacgcggataatgagtgagtcgttagcggtcggcaacccttcc
aaatgtagccaccacaatgattccacactatcaacgttgccctgcagcaatgccatcgaa
ggagtaaaattatttccacactttgaggaaacgactgcatttaaacatgtagaaagtcgt
cttcactcggggttatccccaccttgctactcgcagatttcttctgggttgcattttgag
aggttttctatcccccagttcgatggcgtcaagccatacagtgcagaaagtaacatcccc
atcatgccctttaccgtctacaagggagagcttgtctacacttctccctatcatcctctg
acgttccacttcaacaatttgattaagtatccagaatcgctgtcatacttcggggcccca
gcactcaactcagccttgagcgcagttaccaacattgacagagagattgccatgcatact
caacagctttctgaacttactgttgagaagaaccgggcgagattagagtcagtgcccacc
acaacctcggctcctggcaaaccgaagaagggacatctgtgtttatactgtggcaaactc
tactcccgcaaatatggactcaagatacatatgaggactcatacaggttacaaacctttg
aagtgcaaagtgtgtttcagaccttttggggacccgagcaatctaaataagcacatccgc
ctacacgcagagggcaacgcgccgtataggtgtgagttttgtggaaaagtgttggtccgc
cgaagagatctggagaggcatgttaagtcgagacatccgggaaaaacgattaaaaattct
gatgataaaacggagagcactttccaagaccaggagcaaaacaatgactacagcaacgat
agcgatgtcgacgtttgtttcacagacgatcacagtgaccaggaatctggaaagaatact
ggtcaatag
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