Polyodon spathula (Mississippi paddlefish): 121317735
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Entry
121317735 CDS
T07273
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121317735 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121317735 (myo5b)
04131 Membrane trafficking [BR:
pspa04131
]
121317735 (myo5b)
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121317735 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121317735 (myo5b)
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121317735 (myo5b)
mRNA cycle factors
P-body specific factors
121317735 (myo5b)
Membrane trafficking [BR:
pspa04131
]
Others
Actin-binding proteins
Myosins
121317735 (myo5b)
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
121317735 (myo5b)
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121317735 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
121317735
NCBI-ProteinID:
XP_041109817
LinkDB
All DBs
Position
1:complement(34453511..34574575)
Genome browser
AA seq
1820 aa
AA seq
DB search
MPEEYNFYAKYTRVWIPDPEEVWKAAEIIKDYKEGDPILHLKLEDESTIEYAINPKTNQL
PFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQMSIY
GEDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRY
FATVGGSASETNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFNRQFHIIGANM
RTYLLEKSRVVFQAEEERNYHIFYQLCASANLPEFKDLALNSAEDFFYTTQGGNIYIEGV
DDAEDFEKTRNAFTLLGVKEAHQISIFKIIASILHLGNVDVRAERDGESCNISKEDAHLN
HFCELLGVEHDQMEHWLCHRKLVTTAETYVKTMSMQQAVNARNALAKHIYAQLFNWIVEH
INKALHTTSKQHSFIGVLDIYGFETFEFNSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFCDNQPCIDLIEAKLGVLDLLDEECKVPKGTDQNWAQKLYDRHSDSCHFQ
KPRMSNTSFIIVHFADKVEYQCDGFLEKNRDTVYEEHISILKASKFQLVADLFHDGKDPV
PTTSTTKTSKVHVRSAKQIPKAPNRDHRKTVGHQFRNSLNLLMETLNATTPHYVRCIKPN
DEKLAFSFDPSRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLMKKKEIVLSDK
KLTCKNLLGNLVKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRFACIMIQKTVRGWLQK
VKYRKIKKAAMTMQRYGRGYLARRLADQLRKTRAAIVFQKQLRMLRVRRAYLKIRNATIT
IQAYARGMFDRQLYHEFLLHHKAMIIQKYARGWMERKKFKRARNAAVVIQCSYRRLQARR
ELKQLKIEARSAEHLKKLNVGMENKIVQLQRKMDDQSKEYKSLNEQLSMANMAYSVEVEK
IRKELEQYRGKNGEENQISSLQEEVQRLQTKLNKAQAEKKQLEDTYYTEKEDLLKRLGDL
EEENALLKRDKEEMNQKILSQSKDSEDQVTSKTLKESQQKAELDDERARYQKLLKEYSRL
EQRYDNLQEEMSLARFHPGHRRNPSNQSSLGSDSNYPSITSEVGDTEDTLQQVEDMGMEK
AAMDITVFLKLQKRVRELEQERRRLQVDLEKMEELAKRKGDEHKDTADPDHDADSAYNSL
KRQELESENKKLKNDLNELRKAIVDRATENNSSNELQDSYNVLLNQLKSANEELDVRKEE
VLNLRTQIVSCSQQKEPITHIENKKIPDWSNSNKHMDRDDAIEAYQGICETNRLLEAQLQ
SQSRQYEDEMEALRTQIEVFRDEIERKQELLSQTLQLSPEAQVEYSIQQEITRLTNENLD
LKEMVEKLQKNEKKLKRQLKIYMKKVHELEAAEPAVQPERRRHELTRQATVQRKEKDFEG
MLEYCKEDENMLVKNLVTDMKPQVVSATVPCLPAYILFMCIRHADYMNDDQKVHSLLTST
INAIKKVLKKHNDDIEMTSFWLANTSRLLHCLKQYSGDEAFMTQNTAKQNEHCLKNFDLA
EYRQVLSDLSIQIYQQLIKVAEGILQPMIVSAMLENESIPSLSGVKPMGYRKRSSSMVDG
DNSYTLEAVIRQLNAFHSTMCDHGLDPEIIQQVFKQLFYMISAVTLNNLLLRKDVCSWST
GMQLRYNISQLEEWLRGKNLQQCGAVGTMEPLIQAAQLLQVKKKTTEDARAICSLCTSLT
TQQIVKILNLYTPLNEFEERVTVSFIRNIQGQLQGRNDPQQLLLDFKHTFPVLFPYTPSA
LSLETLHIPASLNLDFLTRV
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgccagaggagtacaacttctacgctaagtacacaagggtgtggatccctgaccctgaa
gaagtttggaaagcagctgaaattatcaaggactacaaggagggagatccgattctgcat
ctcaaattggaagatgagtcgactattgagtatgccattaacccaaagaccaaccagctg
ccattcctacgaaacccggatatcctggtgggggagaatgacctgacagcgctaagttac
ctccacgaacctgcagtccttcacaacctgaaggtgcgctttctggagtccaatcacatc
tacacatactgtggaattgtgctggttgccattaatccgtatgaacagatgtccatctat
ggagaagatgtcatttacgcttacagtgggcagaacatgggtgacatggatccccacatc
ttcgcagtggcagaggaggcttacaagcaaatggccagagatgagaagaaccagtccatt
attgtgagtggggaatctggggcagggaagacggtgtctgcaaaatacgccatgcgttac
tttgctacagttggtggatctgccagcgagaccaacgtagaggagaaggtgctggcgtcc
agtccaattatggaggccattggaaacgccaaaacgacaagaaatgacaacagcagccgc
tttggaaaatatatcgagattggcttcaatcgccagtttcacatcattggtgccaacatg
agaacttatcttctggaaaagtcaagagttgtcttccaggcagaagaagagagaaattac
catatattctaccagctgtgtgcctctgccaatctacctgagtttaaggacctagccctg
aacagtgcagaggacttcttctacaccacccagggtggtaacatctacatcgaaggggtt
gatgatgctgaggactttgaaaagacaagaaatgccttcacattgctaggtgtcaaggaa
gctcatcagattagcatatttaaaataattgcatcaatcctccatctgggaaatgttgac
gtccgtgcagaaagagacggggaatcgtgcaatatctcaaaagaagacgcccatctcaac
cacttctgtgagttgctgggggtggagcacgatcagatggagcactggctgtgccaccgc
aagctggtgactacagcggaaacctacgtcaagaccatgtccatgcagcaggcggtcaat
gccaggaacgctcttgccaagcacatctatgcccagctcttcaactggattgtggagcac
atcaacaaagcccttcacaccaccagcaagcagcactccttcattggagtgctggatata
tacgggtttgagacttttgaattcaacagttttgagcagttttgcatcaactatgccaat
gaaaagctgcagcagcagtttaattctcatgtcttcaaactggagcaggaagaatacatg
aaggaacaaatcccctggacacttatagatttttgcgacaaccagccctgcattgacctc
attgaggcgaagctgggtgtgctggacttgctggatgaggagtgcaaggtgccaaaagga
actgatcagaactgggcccagaaactctatgacaggcattctgacagctgccactttcag
aagcccaggatgtccaacacctcctttataattgttcactttgctgataaggtggagtac
cagtgtgatggttttcttgagaaaaaccgggacacggtgtatgaagaacatatcagtatt
ctgaaagccagtaagttccagctggtggccgaccttttccacgatggcaaagatcctgtt
cccaccacatccaccacaaagacttcaaaggtccatgtccggtctgccaaacagatcccc
aaagccccaaatcgggaccacaggaaaaccgttggccatcagttccgaaactcacttaat
ttattaatggaaactctgaacgccacaactccccactacgtacgttgtatcaagcccaac
gatgagaaacttgctttctcgtttgaccccagcagagcagtgcagcagctgagagcctgt
ggtgtgttggagaccattcgtatcagtgcagctggatacccttccagatggacataccct
gacttctttaacagatacagagtattgatgaaaaagaaggaaattgttctttcagacaaa
aagctcacctgcaagaatctgctggggaacctggtgaaggatccagacaagttccagttt
ggaagaaccaagatcttcttccgcgctggtcaggttgcctacctggagaagctacgagca
gataagttccgctttgcctgcatcatgatccagaagaccgttcggggctggctgcagaaa
gtgaagtacaggaagataaagaaggccgccatgacaatgcagagatatgggcgtggctat
ctggcacgcagactggcagatcagcttaggaagacccgagccgccattgtgttccagaag
cagttgaggatgctgcgtgtccgtagggcctacctgaagattcgaaacgctacgattacc
atccaggcttacgcaagaggcatgtttgacaggcagctttaccacgagttcttgttacac
cacaaggcaatgatcattcagaaatatgccaggggctggatggaacgaaagaagttcaag
cgtgcccgaaatgcagccgtcgtgatccagtgttcctaccggcgactgcaggctcggcgt
gaactgaagcagctgaagatagaggcacgctcagctgagcatttaaaaaagctcaatgtc
ggcatggagaacaagatagtgcagctacaaaggaagatggatgatcagagcaaggagtac
aagagcttgaatgagcagctgagtatggccaacatggcttactctgtggaagtggagaag
atccgtaaggagctggaacagtaccgtggcaagaacggtgaagagaaccagatcagcagc
ctgcaggaggaggtgcagaggctccagaccaagttgaataaggcgcaggctgagaagaag
cagctggaggacacatactacactgagaaagaagatcttctaaagagattgggagatctc
gaggaagagaatgcactattgaaacgtgacaaagaagagatgaaccaaaaaatactgagt
cagtctaaagactctgaagaccaggtcaccagcaagacactgaaggagagccagcagaaa
gctgaactggacgatgagagggcgcgctatcagaaactgctgaaggagtattcccgactt
gagcagagatacgacaacctccaggaggagatgtccctggccaggtttcatccaggacac
aggagaaacccctccaaccagagcagcctgggctcagactccaactacccatccatcacc
tctgaggtcggagacacggaggacaccttacagcaagtggaggatatgggcatggagaag
gcagccatggacataaccgtgttcctgaagctgcagaagagagtgagagagctggagcag
gaaagacgcagactgcaggtcgacctggagaagatggaagagctggccaaaagaaagggt
gatgagcacaaggacacagcagatccagaccatgatgcagattctgcctacaacagccta
aagagacaggaattggaatcagaaaacaaaaagttgaagaatgatctgaatgaactgagg
aaagccattgtggatagggccaccgagaacaactcctccaatgaacttcaggatagctac
aacgtgctgctcaaccagctcaagtcagccaatgaggagctggatgtgcgcaaggaggag
gtgctgaacttgagaacacagatagtgagctgctcccagcagaaagagcccatcacacac
attgaaaacaagaaaatacctgactggagcaacagtaacaaacacatggacagagacgat
gccattgaggcctatcagggaatctgcgagactaacagactcctggaagcccagctgcag
tctcagagcaggcagtatgaagacgagatggaggctctgcgtactcagatcgaggttttc
agggacgagattgagaggaagcaggagctgctctcccagaccctgcagctctcccccgag
gctcaagtagagtacagcatacagcaggagatcacacgcctcaccaatgagaacctggac
ctgaaagagatggtagagaagctgcagaagaatgagaagaagctgaagagacagctgaaa
atttacatgaagaaggttcacgaactggaggctgctgagcctgcagtgcagcctgagagg
cgccgccatgagctgactcggcaggcgacggtccagaggaaggagaaggattttgaggga
atgctggagtattgcaaggaagacgagaacatgctggtcaaaaaccttgtcacagatatg
aaaccccaggtggtgtctgccacagtgccctgcctgccagcctacatcctcttcatgtgc
atcaggcacgcagattacatgaacgacgaccagaaggtgcactccctgctcacctccacc
atcaacgccatcaaaaaagtattaaagaaacacaatgatgacattgagatgacctccttc
tggttggctaacaccagccgcctcctgcactgtctgaagcagtacagcggagatgaggcc
ttcatgacccagaacacagccaagcagaatgagcactgcctgaagaacttcgacctggcg
gagtacaggcaggtcctcagcgacctctccattcagatctaccagcagctcatcaaagtg
gcggagggaatcctgcagcccatgatagtgtctgccatgctggagaacgaaagcatccca
agcctttctggtgtcaagcccatgggttacaggaaacgctcctccagtatggtagatgga
gacaacagctacaccctggaggccgtcattcgtcagctgaacgccttccactccaccatg
tgtgaccacggcctggaccccgagattatccagcaggtcttcaagcagctcttctacatg
atcagcgcagtgacactcaacaacctgctgctgaggaaggatgtgtgctcctggagcact
gggatgcagctcaggtataacatcagccagctggaggagtggctgcgggggaagaacctg
cagcagtgcggagcggtgggcaccatggagcccctcatccaggctgctcagctgctgcaa
gtgaagaagaaaaccacagaagatgccagagccatctgctccctgtgcacatcactcacc
acccagcagattgtgaagatactgaatctgtatactccactgaatgagtttgaagaacgt
gtaacagtgtctttcataagaaatatccagggtcagctacaagggcgcaatgatcctcag
cagctgctgcttgacttcaaacacacgttccctgtccttttcccttacaccccttcagct
ctcagcctggagaccttgcacataccagccagcctgaacctggacttcctaaccagggtt
tga
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integrated database retrieval system
