Polyodon spathula (Mississippi paddlefish): 121317840
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Entry
121317840 CDS
T07273
Name
(RefSeq) zinc phosphodiesterase ELAC protein 1-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121317840
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
121317840
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
121317840
Prokaryotic type
121317840
BRITE hierarchy
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
121317840
NCBI-ProteinID:
XP_041109879
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Position
1:34724306..34729425
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AA seq
368 aa
AA seq
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MAMDLTFLGTGSAYPSPHRGASALVLRIEGDCWLFDCGEGTQTQLMKSQLKASRITKVFI
THLHGDHMFGLPGLLCTVSLHCTSTAGKDHQPVEIYGPVGLRKFLRVTLGLSSSQLLFPY
VVHELVPTADQSPPEGLLDPKMTNCDEGLHPQEGQGRTIHLDPADNSYTLIESEQVVVKA
FQLYHRIPSFGFVVEEGERPGRLNVQKLKELGIKAGPVYGRLKTGQSVVLENGVTVFPSD
VLEEPIPGRKICILGDCCSLVGDAGQQLCHGADVLVHEATLDDTQKDKAMEHGHSTPSMA
AEFAKACQAKQLALYHFSQRYKPPALLKEGDEDDVMELKRQAAAHLNGQEVILAEDFLTI
VIPIKKGI
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggctatggatttgactttcctggggaccggctctgcctacccttcgccgcatcgcggt
gcctcagcgctggttcttcggatagagggggactgctggctgtttgactgcggtgaaggg
acacagacgcaactaatgaagagccagttgaaagctagtaggatcacaaaagtttttatc
acccatcttcatggggaccacatgtttggactcccaggtcttctctgcactgtgagcctt
cactgcacttccactgctggcaaagatcaccagcctgtggagatctatggaccggttggg
ctgagaaagtttctccgagtcactctggggctttccagttcacagctgctgtttccttat
gtagtccatgagcttgttcctactgcagaccagagtccaccagagggacttctggaccca
aaaatgactaactgcgatgaaggacttcatccacaagaaggccaaggaaggactattcac
ctggacccggcagataactcctacactcttattgaaagcgagcaagtcgttgttaaagca
tttcagctttatcatcggataccttcctttgggtttgtggtggaggaaggggagcgtcca
ggaagactaaatgtacagaagctgaaggaactgggaataaaggcaggaccagtttatggc
agactaaaaactggacaatctgtagtcctagaaaatggggtcacagttttcccgtcagat
gttttggaggaacctatcccaggaagaaagatttgtatcttgggggactgctgcagcctt
gtgggcgatgctggtcagcagctgtgccatggagcagatgtccttgtccatgaagccacg
ctggatgacacccagaaagacaaggccatggagcacgggcacagcactcccagcatggca
gcagagtttgctaaagcgtgccaagcaaagcaactggctctttatcattttagccagaga
tacaagcccccagctcttctaaaagagggggatgaggatgatgtcatggaactgaaaagg
caagctgcagcacatttaaatggccaggaggttatattggctgaagattttttaacaata
gtaattccaattaaaaaaggaatctag
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