KEGG   Polyodon spathula (Mississippi paddlefish): 121317849
Entry
121317849         CDS       T07273                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pspa01009]
    121317849 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pspa03036]
    121317849 (kdm5a)
Enzymes [BR:pspa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121317849 (kdm5a)
Protein phosphatases and associated proteins [BR:pspa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121317849 (kdm5a)
Chromosome and associated proteins [BR:pspa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121317849 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 PHD_5 nec1
Other DBs
NCBI-GeneID: 121317849
NCBI-ProteinID: XP_041109883
LinkDB
Position
7:complement(40642439..40762352)
AA seq 1708 aa
MSVYSEFVPPPECPVFEPSWEDFSDPLGFINKIRPIAEKTGICKIRPPEDWQPPFACDVR
NFRFNPRVQRLNELEALTRVKLNFLDQIAKFWELQGSMLRIPHVERKILDLYLLSKIVSS
EGGFETVCKEKRWSKVANRMGYPPGKGTGSLLRSHFERILFPYELFQCGATLSGIHKLAE
GNEDREEEDEEEEEEDEEDEEDGGEEKQEEEAVEEEEEKLSEGSQCPHKDPILQGNNPRE
RRSRHLRSSEVMTGIPVVPTILAFKEHGFNKKHRNLKSHAFALKMQPRKETLEVNFIDLY
VCLACGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCLATECSKPHEAFGF
EQAVREYTLQSFGEMADHFKSDYFNMPVHMVPTELVEKEFWRLVSSIDEDVIVEYGADIS
SKDVGSGFPVRDGKRKLHPDEEEYANSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVG
MCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPAHAAQKLEAVMKKLAPELFDSQPDLLH
QLVTIMNPNVLIEHGVPVFRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPI
GRQCVSHYRRLHRYCVFSHEELICKMVADPESLDVELAATVFREMEEMIAEETRLREAVL
QMGVLASEQEVFELVPDDERQCEKCKTTCFLSALTCSCNPDRLVCLHHAADLCSCPLLSK
CLRYRYALEEFPSMLYGVKSRAQSYDAWAKRVTEALDSDHKNKKDLIELKVLLEDAEDRK
YPENNLFRKLREMVKEAETCSSVAQLLLSRKQRHRQRPESSKTRSKLTVEELKAFVDQLF
RLPCVISQARLVKELLENVEEFHERAQAALVDETPDSSKLQALLDMGAGLDVELPQLPRL
KQELQQARWLDEVCLTLAEPHRVTLDVMKRLIDSGVGLAPHHAVEKAMAELQEILTVSER
WEDKAKTCLQARPRHSMVTLESIVKEAKNIPAFLPNVLALRDALQKAKDWTGKVEAIQNG
SNYAYLDQLESLLVRGRPIPVRLDALPQVESQVASARAWRERTGRTFLKKNSIYTLLQVL
SPRQDIGVYGSSKSKRKRAKELLEKERDLEMECLSDLEEGAEEARDPAAVVAAFKTKEQK
ETEAMHSLRAANLAKMAMADRIEEVKFCLCRKTASGFMLQCELCKDWFHSTCVPLPKTGS
QKKGLGWQSKEVKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMGW
QDRARQALATEELSSALAKLSVLSQRMVEQAAREKTEKIINAELQKAAANPDLQGHLHTF
QQSGFSRVMGGVATSPRQSVEYDDEETDSDEDIRETYRYDMKDAASVKSFGSLEPNLFCD
EEIPIKSEEVVTHMWPTTPSFCAEHAYSSASKSSTQSVSTPRKQSRKTPLVPRSLEPPVL
QLSPCAKAQLEELMMVGDLLEVSLDETQHIWRILQATHPPSEERVLQVMEGEGLVEKPMK
LKVKDSSEKDSLEKKRKRKLEKAEQLLLVAGEGRPRSKELKKAEGKPKKKKLKLNTEKSK
ELKQLAKRLAKEEKEKKRKEKAAAKAEVSKEIIDKKKEKKVLDIPSKYDWSGAEDSDDEN
AVCAAKSCQRPCKDKVDWVQCDGGCDEWFHQVCVGVTCEMAENEDYICTACSRKAAPGRG
VSEESLGLALPVCTRSLPSPSLELQASS
NT seq 5127 nt   +upstreamnt  +downstreamnt
atgtcggtatattccgagttcgtccctccaccggaatgcccggtgtttgagccgagttgg
gaggatttttctgaccctttgggatttatcaacaagatccgacccatcgccgaaaaaact
ggcatctgcaaaatcagaccacccgaggactggcagcctccctttgcctgtgatgtgagg
aacttccgtttcaatcccagagtgcagaggctgaatgaactggaggcactgaccagagtg
aagctgaactttctggatcagattgcaaagttctgggagctacagggttcaatgctgaga
atccctcatgtcgagagaaagattcttgatctgtatcttcttagtaagattgtgtccagc
gagggtggttttgagaccgtctgtaaggagaaaagatggtctaaggtagctaaccggatg
gggtatcccccaggaaaaggaacaggctctcttctgcgctcccactttgagaggatcctc
ttcccttatgagctgttccagtgcggggccacgctatcgggaatccacaagctggccgaa
gggaacgaggacagagaggaggaggatgaggaggaggaggaggaggacgaggaagatgaa
gaggatgggggtgaggaaaagcaggaggaagaggcagtagaggaggaagaagagaagctg
agcgaagggtctcaatgtccgcacaaagaccccatacttcaaggaaacaaccctcgcgag
cgaagatcgaggcacctgaggtcctcagaggtaatgacaggaataccagtggtaccgaca
attcttgcttttaaagagcatggatttaataagaagcatcgtaaccttaagtcccacgcc
tttgctctaaagatgcagccacgcaaggagactctggaggttaactttattgacctgtac
gtgtgcctggcatgtggccgtggagacgaggaggaccggcttctcctgtgtgatggatgt
gatgacagctaccacaccttctgcctcatcccccctctccaagacgttcccaaaggggac
tggcgctgccccaagtgtctggcgaccgagtgcagcaagccgcatgaagcctttggtttt
gagcaggctgtgagagagtacacactgcagagctttggggagatggcagaccacttcaag
tctgattacttcaacatgcctgtacatatggtgcccactgaattggtggagaaggagttt
tggcgtctggtcagcagtattgacgaggatgtgatcgtagagtatggggctgacatcagc
tccaaggatgtcgggagcggctttcctgttcgggatggcaagaggaaactccacccagat
gaggaggagtatgcaaactcaggctggaacctgaataacatgcctgtgctggagcagtca
gtgctggcacacattaatgtggatatctctgggatgaaggtgccctggctatatgtggga
atgtgcttctcttcattctgctggcacattgaggatcattggagctactccatcaactac
cttcactggggtgagccgaagacttggtatggtgttcctgcacatgcggctcagaagttg
gaggcggtgatgaagaagctggccccagagctgtttgattctcagcctgatctcttacac
cagctggttaccataatgaaccccaatgtgctcattgaacacggagtgcctgtattcagg
accaatcaatgtgcaggagagtttgtagtgaccttcccacgagcttatcacagcggcttt
aaccagggctataactttgctgaagcagtcaatttctgtactgcagactggctgccgatc
ggtcgccagtgtgtttctcattaccggcgcctccatcgctactgtgtcttctcacacgag
gagcttatctgcaagatggtggcagacccagagagcctggacgtggagttggctgctacc
gtcttcagggagatggaggaaatgatagctgaggaaacccggctcagagaggctgtccta
cagatgggtgtgctggcctcggagcaggaagtatttgagctggtcccggatgacgagcgc
cagtgtgagaagtgcaagaccacctgcttcctgtcagcccttacctgctcctgtaaccct
gaccggctggtgtgtctacaccacgctgcagacctctgcagctgtcccctgctcagcaag
tgcctcaggtacagatatgccctggaggagttcccctccatgttgtatggggtgaagtct
cgggctcaatcctatgacgcttgggcgaaaagagtaacagaggcattggattcagaccac
aaaaacaagaaagatctgattgagctgaaggtgctgttggaagatgcagaggacaggaaa
tatccagagaacaatctgtttcgcaagctgcgggaaatggtgaaagaggcagagacctgc
tcctcagttgctcagctgctgctcagtcgcaagcaaaggcataggcagcgtccggagagc
agtaagactcgcagcaagctgactgtggaggagttgaaggcctttgttgaccagcttttc
cgcctgccctgtgtcatcagccaggctcgacttgtgaaggagctcctggagaatgtggag
gagttccatgagcgtgcacaggcggcactggtggatgagacccctgactcctccaagctg
caggctctgctagacatgggtgctggattggacgtggagctgccccaactgccccggctc
aagcaagaactgcagcaggcccgctggctggacgaggtgtgcctgaccctggctgaaccg
caccgtgtcaccctggatgtcatgaaaaggctcattgactcgggcgtgggcctggcgccg
caccacgctgtcgagaaggccatggctgagctgcaggagatactcactgtgtctgagcgc
tgggaggacaaggccaagacctgcttacaggccagaccacgccacagcatggtcaccctg
gagagcattgtgaaagaggcaaaaaacatcccagcattccttcctaatgtgctggctctg
agagatgcgctacagaaagccaaagactggactggaaaagtagaagccatccagaatggg
agtaactatgcctacctggaccagttggaaagcttgctggtgcgtggccggccaatccca
gtaagactggacgccctacctcaggtagagtctcaggtggcctcagcccgagcctggcga
gagaggaccggcaggacgttcttaaagaagaactccatctacacactcctgcaggtgttg
agccccagacaggatattggggtctacgggagcagtaagagcaagaggaaacgggccaag
gagcttctggagaaggagagagacctggagatggagtgcctgagcgacctggaagagggg
gccgaggaggcacgtgacccagctgctgtcgtggccgccttcaaaaccaaggaacaaaag
gaaactgaagccatgcactccctgcgggcagccaacctggcaaaaatggcaatggcggac
cgcattgaggaagtaaagttctgcctgtgccggaaaacagccagcggtttcatgttgcag
tgtgagctgtgcaaggactggttccacagcacctgcgtgcccttacctaagaccggttcc
cagaagaagggtctaggctggcagagcaaagaggttaagttcctgtgtccgctgtgtcag
cgttcacgccggcctaggctggagaccatcctctcactgctggtctccctacagaagcta
ccggtcagactcccagagggtgaggccctgcagtgcctgaccgagagagccatgggctgg
caggaccgcgcaagacaggccctggccacggaggagctgtcctcagctctggctaaactc
tctgtgctcagtcagcggatggtagaacaagcggccagggagaagacagagaagatcatc
aacgcagagctgcagaaagcagcagccaaccctgatctgcagggacacctgcatacgttc
cagcagtctggcttcagtcgggtcatgggaggagttgccacatcgccgaggcagtctgtg
gaatacgatgacgaggagacagattcagatgaagacatccgcgagacatacagatacgac
atgaaggacgcagcaagtgtgaagtcttttggcagccttgaaccaaacctgttctgtgac
gaggaaattcccatcaagtcagaagaggttgtgacccacatgtggccgacgacgccctcc
ttctgtgctgaacacgcttactcctcagcctcaaaatcctccactcaaagtgtgagcact
cctcggaagcagtcccggaagacccccctggtcccacgtagcctggagccccctgtgctc
cagctgtccccctgcgccaaggcccagttggaggagctgatgatggtgggagacctcctg
gaggtgtctctagatgagacgcagcacatctggaggatccttcaggccactcaccctcct
tcagaggagagggtcctgcaggtcatggagggtgaagggctggtggaaaaacccatgaag
ctcaaggtgaaggactcctcggaaaaggactccttggaaaagaagcgtaagcgcaagctg
gagaaagcggagcagctgctactggtagccggtgaaggacggcccagatccaaggagctg
aagaaggcagagggcaagcccaagaagaagaagctgaaactcaacacggagaagtccaaa
gaactcaaacagctagccaagcggctggccaaggaggagaaggagaagaagaggaaggag
aaagcggcggcaaaggctgaggtgtccaaagagataattgataagaagaaagagaagaag
gtgctcgacatcccctccaagtatgactggtctggggcagaggactcagatgatgagaac
gcggtgtgcgctgcaaagagctgccagcgaccctgcaaggacaaggtagactgggtgcaa
tgtgacggcggctgtgacgagtggttccaccaggtctgtgtaggagtcacgtgcgaaatg
gcagagaacgaggactatatctgcacagcttgctctcggaaagctgcaccaggaaggggg
gtgtcggaggagagcctaggactggcactacctgtatgcactcggagcctaccttccccc
tcactggaactacaagcgagcagctag

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