Polyodon spathula (Mississippi paddlefish): 121317870
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Entry
121317870 CDS
T07273
Name
(RefSeq) syntaxin-1A-like
KO
K08486
syntaxin 1B/2/3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121317870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121317870
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121317870
Membrane trafficking [BR:
pspa04131
]
SNARE
Syntaxin (Qa)
Stx-PM
121317870
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121317870
Exosomal proteins of other body fluids (saliva and urine)
121317870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
6PF2K
DUF7327
Motif
Other DBs
NCBI-GeneID:
121317870
NCBI-ProteinID:
XP_041109901
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Position
7:complement(52455281..52456165)
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AA seq
294 aa
AA seq
DB search
MKDRLEELKNLREDDEGFPDDDFLGYDNPSFHEDESKEMEEFFRTVSDIAAELDGLEDIS
EDIAKKQAQVLCSTAMETISAEKKLLGDLKNEFTGRAKGIQANLGQMKEASSFQGMCAEG
RIRQCQFNVLAQRHKEIMVCHFAKEMEYVGRLKEQIKRQTELAGLELAEEDLQMLVESPS
APQIVGANIHVLEAQKHLALAHERHQQLLTLEAQISELHELFFHLEVLVSEQQGIVDNIE
HNVIQAVDYISQSNEQVKKAFKYQRRSRIAAVFSAVLGMCACCACLSCVSRVVP
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaaggataggctggaggagctgaagaacctgagggaggatgatgaaggctttccagat
gatgacttcctgggctacgataacccctctttccatgaagatgagtcaaaggagatggag
gaattcttcaggacggtctcggatattgcagcagaactggatgggcttgaagatatctca
gaggacattgccaagaagcaggcgcaggtcctgtgcagcactgcaatggagaccatcagt
gctgagaagaagctgctgggggacttaaagaatgagttcactgggcgagccaaggggatc
caagccaatctgggacaaatgaaggaggcttcctccttccaagggatgtgtgctgaggga
cggatccgacagtgtcagttcaatgtcctggcacagcgccacaaggagatcatggtctgc
cattttgccaaggagatggaatatgttggccggctgaaggagcagattaagaggcagacg
gaactggctgggttggagctggctgaggaggacctccaaatgctggtggagagtccttca
gcaccccagattgtgggcgctaacatccatgtcctggaagcccagaaacatttggccctg
gcccatgaacgccaccagcagttgttgaccctggaagcccaaatctcggagctccacgag
ctcttcttccaccttgaggtgctggtgtcagagcagcagggcatagtggacaacatcgag
cacaacgtcattcaggccgtggactatatcagccagtccaacgagcaggtgaagaaggca
ttcaagtaccagagacggtcccgcatcgctgcagtcttctcggctgtgctggggatgtgt
gcctgctgcgcttgtctctcttgtgtgtccagggtggtgccttga
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integrated database retrieval system
