KEGG   Polyodon spathula (Mississippi paddlefish): 121317881
Entry
121317881         CDS       T07273                                 
Name
(RefSeq) RNA-binding E3 ubiquitin-protein ligase MEX3C-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspa03019]
    121317881
   04121 Ubiquitin system [BR:pspa04121]
    121317881
Enzymes [BR:pspa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121317881
Messenger RNA biogenesis [BR:pspa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121317881
Ubiquitin system [BR:pspa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121317881
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 KH_2 KH_DEAH11_2nd zf-C3HC4 Prok-RING_4 zf-P11 zf-RING_4
Other DBs
NCBI-GeneID: 121317881
NCBI-ProteinID: XP_041109914
LinkDB
Position
1:complement(34759080..34764569)
AA seq 579 aa
MTSSTPLLVTEETEPELPPLVVERLEDLGLDEHGTQSYSGPQEAPIAAVHELHQAARFRL
LGSVLELQPQSRHQQQDEEGELEEEELVETEPNTLNTQARVPCLGSVMLPGLEAPETVML
YSGGVEDPQQQVPGMIMILPPGYGEHGFDGDRSSVMRRKSVNTTECVEVPTSEHVAEIVG
RQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVAMAKREILSAAEHFSMIRASRNK
TGPLTGGLPGAPNLPGQNTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEP
VFEVTGMPENVDRAREEIEAHIAMRTGSYVEMTGEENDFHYNGTDVGFEGGPGGGGAWLN
NRAPPGGGPSGTRVISNYRNDSSSSLGSGSTDSYFGGNRMADFSPTSPFNAGSSFWFGES
LLPLGSEDLGGVESPSFDSLTAQPPPPQHQVTWSPFEHGNPLSGFEGKNQRRDSQPSTPR
LSPTFSDSQEHYRMYTQAFSYSSESSTSSSPPDSASSAGLCQGKRDCIRCFESEVIAALV
PCGHNLFCMECANRICENREPLCPVCQAPVSQAIRILSM
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgaccagtagcacaccattactggttaccgaggagacggagcccgagctcccgccgctg
gttgtagaaaggctggaagacctgggcctcgatgagcacggcacgcagagctattcaggg
ccgcaggaagccccgatcgctgcggtacatgagcttcaccaggcggcccggttcaggttg
ctcgggagcgtgctggaactgcagccgcagtcgcgacatcagcagcaggacgaggaagga
gaactggaagaggaggaattagtcgagacagagccaaacacgctcaacacacaggcccgt
gtaccatgtttaggctctgttatgctgccggggttggaggccccagagacggtcatgctg
tatagcggcggcgtggaggacccccagcagcaggtccccgggatgataatgatacttccg
ccaggttacggagagcatggtttcgatggcgatcgttcttctgtcatgcggaggaagagc
gtcaacaccacggagtgtgtcgaggtgcctacctccgagcacgtagcagagatagttggc
aggcagggttgcaaaatcaaggcattgcgggccaagaccaacacgtacatcaagacaccg
gtgcgaggggaggagccagtctttgtggtgacagggaggaaagaggatgtggccatggct
aagcgggagatcttgtccgcagcagagcatttctctatgatccgagcatctcgcaacaag
actggcccattgaccggaggactccccggtgcccccaacctgcctggccagaacaccatc
caggtgcgtgtgccttatcgggtcgtaggtttagtggtgggtcccaagggtgccaccatc
aagcggatccagcagcagacgcacacctatattgtgacccctagccgagacaaagagcca
gtgttcgaggtgacgggcatgccagagaatgtggaccgggcgcgtgaagagattgaggcg
cacattgccatgcgaaccggcagttacgtggagatgactggggaggagaacgacttccac
tacaatggcaccgatgttggcttcgagggggggcctggtggtggtggcgcttggctgaac
aaccgtgccccaccggggggaggacccagtggcacccgcgtgatctccaattaccgcaac
gacagctccagctccctggggagcggatccaccgattcctactttgggggcaaccgcatg
gcagacttcagtcccaccagccccttcaatgcaggcagcagcttctggtttggggagtca
ttgctgcccctgggctctgaagacctggggggagtggagtctcctagctttgattccctg
acagcgcaacctcctccaccacagcatcaggtcacctggagcccctttgagcacgggaac
cccctgtcagggtttgaagggaaaaatcaacggcgggatagccagcccagcaccccacgc
ctctcgcccaccttctctgacagccaggagcactaccggatgtacacccaggccttctcc
tactccagcgagagctccacctcaagctcgccccccgactctgccagctcagcagggctg
tgtcagggcaagcgggactgcatcaggtgcttcgagagcgaggtgattgctgctctggtg
ccctgtggccacaacttgttctgcatggagtgtgccaaccgcatctgtgagaacagagag
cctttgtgcccagtatgccaggcccctgtctcgcaggccatcaggatcttaagcatgtga

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