Polyodon spathula (Mississippi paddlefish): 121317903
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Entry
121317903 CDS
T07273
Symbol
poli
Name
(RefSeq) DNA polymerase iota
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121317903 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121317903 (poli)
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121317903 (poli)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
121317903 (poli)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_HHH_1
UBM
IMS_C
HHH_5
Cdd1
IMS_HHH
DNA_pol_lambd_f
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
121317903
NCBI-ProteinID:
XP_041109933
LinkDB
All DBs
Position
1:35298853..35314918
Genome browser
AA seq
746 aa
AA seq
DB search
MEYSNDDDDEPQFGMDEDEDDTEWRYSSFDVAEDIRPAKYFPSSACSSEVASGSVFHGKG
PHRRQNNNRIILHFDLDCFYAQVEMIRNPELRDKPLGVQQKYIVVTCNYAARKHGVNKLM
SVTDAKEKCPQLILVSGEDLTHYREISYKVTELLEEYSPLVERLGFDENFVDATELVEKR
LRHVASSDVSVNGHIYNNHSIDSHVEEHIRLAVGSQIAAELRTALFKKLGLTSCAGIATN
KILSKLVAGIFKPNQQTTLLPESTPHLLSCLKHLKKLPGVGYRTAQKLQSLGLSTIQDLQ
GFPLATLEKVLGATAAQRIHSLSHGVDEALVTPSGPPQSLSDEDSFKNISTETEVVQKTE
ELLTNLLDRMQKDGRQPRTARLTIRRFSATNKWFSRESRQCPIPNHIGQKIATGNRDVMA
ALVDILMKLFRKMIDLKAPFHLTLLNVCLSNLQPASTSTRSSIGFFLKHPNQSSFKLNSS
ICSQGESDNSTHAKDQVLSRHKLFDIAAGDLQETNIMTTSGENAADSKKLLDKQQIKSGS
SSSGTDLYLPPGIDPEVFRQLPEDIQREITSTISTTLSSNACKQKKMILQKTASKGDISH
FLWQTPQCESLISSTAEAENSNFLSVECRQDAQIQQNNIDYSSTQVAGSSGEHTEPHSSS
NMDADPMDLQNVNPADQVPSHVDPKVFSELPAELQQELLSEWKQQETVSKIHVNKHIGKA
RAAKETKQTSAKSTQSNNLLKYFKPS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggagtacagcaatgatgatgatgatgagcctcagtttggtatggatgaagacgaggat
gataccgaatggagatatagtagttttgatgtagcagaggatattaggcctgctaaatat
tttccttcttctgcatgcagcagtgaggtcgcgtcaggttctgtgtttcatgggaagggt
ccccatagaagacaaaacaacaacaggatcatattgcactttgacctggactgcttctat
gctcaagtggaaatgatccgtaacccggaattgagagacaaacctctaggtgttcaacaa
aagtacattgtggtcacttgtaactatgcggccagaaaacatggagtgaacaagctgatg
tcagtgacagatgcaaaagagaaatgcccccagctgatacttgtcagtggagaggacctg
acccactacagggaaatatcctataaggttacagaattactggaggagtactccccactg
gtagagagacttgggtttgatgaaaactttgtggatgccactgaacttgtggagaagaga
ctgagacatgttgcatcttctgatgtctctgtaaatggtcacatatataacaatcactct
atagactctcatgttgaagaacacatcaggctggctgttggatcccagattgccgcagag
ctaagaactgcccttttcaagaaactaggtcttacaagctgtgctggaattgccacaaat
aaaatactttccaaactagtcgctggaatattcaaacctaatcagcaaacaacactgctg
ccagaaagtactccgcacctattaagctgcctgaagcacctgaaaaaactgcctggagtt
ggttacagaactgctcagaagcttcagtcgctgggactctccacaatacaggatttgcag
ggctttcccctagcaacactggagaaggtgcttggggccacggctgcccagcgcattcac
agcctgagccatggagttgatgaggctctagtcaccccttcagggccccctcagtctctt
agtgatgaagattcctttaagaatatctctacagaaactgaggttgtgcaaaagactgaa
gaactgttgaccaacctcctagacaggatgcaaaaggatggaagacagcctcgtacagcc
cggctcacaatcaggcgcttttcagcaactaacaagtggttcagccgggagagccggcag
tgtcccattccaaaccatattggccagaaaattgccacaggtaaccgtgatgtcatggcc
gcattagtggatattttaatgaagctctttcgaaaaatgattgacttgaaggcaccattt
cacctaactcttctaaacgtgtgcctgtcaaacctgcagcctgcatcaacctccaccaga
agctctattgggttctttttaaaacaccccaatcagtcttcattcaaattgaattccagt
atttgtagccagggtgagtctgacaacagtacacatgcaaaggatcaggtgttaagcaga
cacaagctatttgatatagcagctggtgacctgcaagagacaaatatcatgactacttct
ggagagaatgcagcagattccaaaaaattactagacaagcagcagataaagagcggatcg
tcatcatcggggaccgacctttatcttcctccagggattgacccggaggtttttagacag
ctccctgaagacattcagagagagattacttcaacaatatccaccaccctgtctagtaat
gcttgcaagcagaaaaaaatgattttacagaagacagcctcaaaaggtgacatttcacac
tttctgtggcagactccacagtgtgaaagtttaatctcttccacagctgaagcggagaat
tcaaacttcttgtcagttgaatgcagacaagatgcacaaatccaacaaaataatattgat
tactccagcacacaggtcgctgggagcagtggagaacacactgaaccacacagttcgtcc
aatatggatgcagacccaatggaccttcagaatgtaaatccagcagatcaggttccctcc
catgtggacccaaaagtgttttcagaactgcctgcagagcttcagcaggaactgttaagt
gagtggaaacaacaggaaactgtttctaaaatccatgtcaataaacatattggtaaagca
agagcagccaaagaaaccaaacagacttcagccaaaagtactcagtctaacaatttattg
aaatatttcaagccaagctga
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