Polyodon spathula (Mississippi paddlefish): 121317920
Help
Entry
121317920 CDS
T07273
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121317920
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121317920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
YdaS_toxin
MS_C
Motif
Other DBs
NCBI-GeneID:
121317920
NCBI-ProteinID:
XP_041109950
LinkDB
All DBs
Position
7:complement(54904580..54909511)
Genome browser
AA seq
270 aa
AA seq
DB search
MYVGYLLDKEAGMYHQGPVRRPGINLPAQNFVSTAQYSEYTGYHHVPNMDSHAQSPGSWG
CPYATQREDWNAYGLGPSNAVPTPMSSSSPGQVSYCSPDYNSMHPAASGVLPPPQENVTV
GPPSPDSERRHSYDWMKKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHYNRYITIRR
KSELAANLGLSERQVKIWFQNRRAKERKIIKKKMGLSDGSGGSVHSDPGSVSPLPLPGSL
SPSINAHIFPTPGMNTLLPIENLQQVTVTQ
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgggataccttctggataaagaagccggcatgtaccaccaaggacctgtaaga
cgccccggcatcaacctgccagcacagaactttgtatcaactgcacagtactctgagtat
acaggatatcatcatgtgcccaatatggacagtcacgcacaatctccggggtcttggggc
tgtccatatgcgacgcagagggaagactggaatgcctatggtctaggaccttcaaacgcg
gtacctacccccatgagtagctcatcgcccggacaagtgtcttactgctcccctgattat
aactcaatgcacccggcagcatctggagtcttaccgccaccccaggaaaatgttacagtg
ggaccaccgtcccctgacagtgagcggcgtcattcgtatgactggatgaagaaaactgta
cagtcatcttcaaccggtaaaacaagaacgaaagagaaatacagggttgtgtatacggat
caccagcggctcgaactcgagaaagaattccattacaacagatacatcacaatcagaaga
aaatccgaactggcggcgaacctcgggctttccgagagacaggtgaaaatctggtttcaa
aatcgccgagccaaagagaggaagattattaaaaagaagatgggtctttctgacggcagc
gggggctccgtgcacagtgacccggggtcggtgagccctctcccgctaccaggctctctc
agtcccagtatcaacgcccatatatttcctactcctggaatgaacactttactgccaatt
gaaaatttacaacaagttacagttactcaataa
DBGET
integrated database retrieval system
