Polyodon spathula (Mississippi paddlefish): 121317927
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Entry
121317927 CDS
T07273
Name
(RefSeq) homeobox protein ARX-like
KO
K09452
homeobox protein aristaless-related
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121317927
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121317927
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121317927
NCBI-ProteinID:
XP_041109958
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All DBs
Position
7:59259715..59261917
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AA seq
284 aa
AA seq
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METLYSNYIKSHHICDPGNVPAQEHLQHASTRGEREVETGVKTEDKPGERLPEDARRARL
EQKCASPGQVDGTCLKRKQRRYRTTFTNFQLEELERAFRKSHYPDVFSREEVALRLDLTE
ARVQVWFQNRRAKWRKSEKAAVLSNDPSLAMASPLSVYLDLPLNQPLSLDLAWRSTHIPV
LELPPSPTAPVFTPTAVGNLGLGALTWASFLRHPLLNPHFNRFFTAVSPLMGTPSLLMKS
PGQSFQPASLVMKDPMTSERKTSSIAELRLQAKEHSAHMPPQDT
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggagacactttactccaattatatcaaatcccatcacatctgcgatccgggaaacgtc
ccagcccaggagcatctgcagcacgcaagtacccggggcgagcgagaggtagaaacgggt
gtgaaaacagaagacaagcccggtgaaagactgccggaggacgcgaggagggcgcgcctg
gagcagaagtgcgcttctccgggtcaagttgacgggacctgcttgaaaagaaagcagcgc
cggtacagaaccacattcacgaacttccagttagaggagttggagagagcgttcaggaaa
tctcactacccagatgtgttctcaagggaagaagtagcattgcgtcttgatttaacagaa
gcccgtgtgcaggtttggtttcagaaccgcagagctaaatggcggaagagtgaaaaggct
gccgttctcagtaacgatcccagcttagccatggcgagcccccttagtgtgtatctggac
cttcccctgaaccagcccttgtctctggacctcgcttggagatccacccatatcccggta
ctcgagctccccccctcccccacggctccagtctttacccccactgctgtgggaaacctg
ggcctcggagcgctgacctgggcctccttcctgagacatcctctcctcaacccacatttc
aacagattcttcacagcagtaagccctctgatgggcacgccctcactgctcatgaaatcc
cccggacagtccttccagcccgcttcccttgtcatgaaggaccccatgaccagtgaaaga
aaaacctccagcattgcggagctgagactacaagcgaaggagcactctgcacacatgcca
ccgcaagatacctag
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