Polyodon spathula (Mississippi paddlefish): 121317952
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Entry
121317952 CDS
T07273
Symbol
rint1
Name
(RefSeq) LOW QUALITY PROTEIN: RAD50-interacting protein 1
KO
K20474
RAD50-interacting protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121317952 (rint1)
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
121317952 (rint1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
121317952
NCBI-ProteinID:
XP_041109979
LinkDB
All DBs
Position
7:complement(389539..431037)
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AA seq
777 aa
AA seq
DB search
MAASIVQETKSLSDGDYRGFSLRHNGTDTGEEDSEIPQYVAELIEAEIGCDLKALKKVSG
LLERMSKEKKQLEEQVLTASSSVPLKMEAALCRAGEVQRALEVLLDRETGVSNTVSQHLE
GAQPWMDKLILRLSQIDETEHYLSYLKWIARIEELSDTIQQHIMTSNVWEAASGLVAMAE
LDIQLQDSSCGHLLSFIRDTVRFWHKILKDKLTRXVSDHFREGSVASLVLSVGANGTELH
NQLESLFTQLLKLQTSDDLITEQRQLPERCGLPPSPPLALPIQIMLLPLQKRFRYHFTGN
RQTNVLSKPEWYLTQVLMWIGNHSDFLEEKVQPILLRAGSAIDARLQFSSGLLTLALEKL
SCDAPRLLYDDVLFCHLVDEVLLFEKELRGTHAYPSSLPGVLHILTEETIFQKWLAVERK
FALEKMDSMLSSEAAWSSQYKDISDVDEMKAPDCAETFMTLLLVITDRYQNLPSPRCRLS
FLALQKELVDDFRIRLTQVMKEESRTPLGPRYCAILNAVNYITAVLADWADSVFFLQLQQ
AELELGAEGPSWPLSPTQAGRLASLEGSVFDEMITLLERLRHDMIGRLVEFILREARERA
KPYCRERWLSLPSQSDQAAMSLSSSACPMMLCLRDHMLQLQQMLCFPLFKSCWQALSERL
DLFIYQDVILSNHFNEGGAAQLQFDMTRNLFPLFGHHCKRPENYFKHVKEGCIVLNLNVG
SALLLRDVLRQGGSETNSLLDPKQPSPVATLNELGIFRLAPSDVEILLSLRTHWPGQ
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccattgtgcaggagacgaagagcctgagcgatggtgattatcgcggcttc
agcctccggcacaatggcacagataccggggaagaggacagcgaaatcccgcagtatgtg
gccgagctgatagaggcagagatagggtgcgatctgaaagcgctgaagaaagtgagcggg
ctgctggagcggatgagcaaagaaaagaaacagctggaggagcaggtgctgacggcgtct
tcctctgtgcctctgaagatggaggcagctctgtgccgggcaggggaggtgcagagggct
ctggaggtgctgctggacagggagacgggcgtctccaacactgtatctcagcacctggag
ggggcgcagccctggatggacaagctgatcctgaggctctcccagatagacgagacggaa
cactacctcagctacctcaagtggatcgctcgcatcgaggagctcagtgacactatccag
cagcacatcatgactagtaatgtgtgggaggcggccagtggtctggttgccatggctgag
ctggacatccagctgcaggactcgagctgtggacacctgctgtccttcatcagagacacg
gtcaggttctggcacaagatcctgaaggacaaactaaccaggtgagtgagtgaccacttc
agggaaggcagcgtggcttcattggtattgtcagtaggggccaacgggacagagctgcac
aaccagctggagtctctcttcacacagctgctcaagctgcagacctcagatgacctcatc
acagagcagaggcagctcccggagaggtgcggcctgcccccctctccccccctcgccctg
cccatccagatcatgctgctgccgctgcagaagagattcagataccacttcacagggaac
cggcagaccaacgtgctgagcaagccggagtggtacctgacgcaggtgttgatgtggatc
gggaatcactctgatttcctggaggagaaggtgcaacccatcctgctgagagccggctct
gccatcgatgccaggctgcagttctcaagcgggctgctcactctggccctggagaagctg
tcctgtgatgctccgcggctgctctacgacgatgttctcttctgtcacctggtggacgag
gtcctgctgttcgagaaggagctgcgaggcacacacgcctatcccagcagcctccccggt
gttctgcacatcctcactgaggagaccatcttccagaagtggcttgccgtcgagaggaag
tttgctctggagaagatggactccatgctgtcctccgaggctgcctggtcctcccagtac
aaggacatcagcgatgtggacgagatgaaggcaccggactgtgccgagaccttcatgact
ctgctgctggtcatcaccgaccggtaccagaacctgccctcgccccgctgcaggctcagc
ttcttggcgctgcagaaggagctggtggatgacttccggatccgactgacccaggtgatg
aaggaggagagccggaccccgctgggcccgcggtactgtgccatcctcaatgctgtcaac
tacatcacagccgtgctggcagactgggcagacagtgtgttcttcctgcagctgcagcag
gcggagttggagctcggtgcagagggcccctcgtggcccctgagccccacgcaggctggc
cgcctggcctctctggagggctccgtctttgatgagatgatcacactgctggagaggctg
cggcacgacatgataggcagactggtggagttcatcctgcgagaggccagggagcgagca
aagccctactgcagagaaaggtggctgtctcttccctcccagtcggaccaggctgcgatg
tcgctctccagctcagcctgtcccatgatgctctgcctgcgggaccacatgctgcagctg
cagcagatgctctgcttcccactgttcaagagctgctggcaggcactgtctgagagactt
gacctgttcatctaccaggacgtgatcctgtccaatcattttaatgaaggtggtgctgct
cagctgcagtttgacatgaccaggaatctgttccctctgttcggacaccactgcaagaga
cccgagaactacttcaaacatgtgaaggagggctgcatcgtgctaaatctcaatgtgggc
tctgctctgctgctgcgtgatgtgctcaggcaggggggcagtgagacaaactcgctcctg
gaccccaagcagccctcccccgtcgccaccctcaatgagctgggcatcttccggctggct
cccagtgacgtggagatcctgctgagcctgcgcacacactggccagggcagtag
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