Polyodon spathula (Mississippi paddlefish): 121317961
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Entry
121317961 CDS
T07273
Name
(RefSeq) ras-related protein Rab-27B-like
KO
K07886
Ras-related protein Rab-27B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121317961
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121317961
04031 GTP-binding proteins [BR:
pspa04031
]
121317961
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab GTPases
121317961
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121317961
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rab Family
Rab3/27 [OT]
121317961
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
GTP_EFTU
MMR_HSR1
ATP_bind_1
AAA_24
IMPa_N_2
Gtr1_RagA
DUF6581
Septin
TPP_enzyme_M
Motif
Other DBs
NCBI-GeneID:
121317961
NCBI-ProteinID:
XP_041109994
LinkDB
All DBs
Position
1:35370780..35437774
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AA seq
217 aa
AA seq
DB search
MTDGDYDYLIKLLALGDSGVGKTTFLYRYTENKFNPKFITTVGIDFREKRVIYSNSGPNG
NAGKNFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN
AYCENPDIVLIGNKADLTDQREVQENQAKELADKYGIPYFETSAATGSDVDKAVITLLDL
IMKRMEQCVQKTAPESANGGGSGKLEAVQHQEKKCAC
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggggactatgattatctgatcaagctcctagcccttggggattctggagtt
gggaagaccaccttcctctacagatacacggagaacaagtttaaccccaaattcatcacc
acagtgggaattgacttcagggaaaagagagtgatatacagtaattcaggaccaaatggc
aatgccgggaaaaattttaaagttcacctacagctctgggacactgcgggacaagaaagg
ttcaggagcctcaccacggccttcttccgagacgccatgggctttttattaatgttcgac
ctcacgagccagcaaagcttcttaaacgtcagaaactggatgagccaactccaagctaat
gcatattgtgagaatccagatatagtattaattgggaacaaagcagatttgactgatcag
agagaggttcaggaaaatcaagcaaaagagctggcagataaatatgggataccatatttt
gagactagcgcagctacaggatcagacgttgataaagcagtaatcacgctcttggattta
ataatgaagcgtatggagcagtgtgtgcagaagacagcacccgagtctgccaacggaggg
ggctcaggaaagctagaggctgtgcaacaccaggagaagaagtgtgcctgttag
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