Polyodon spathula (Mississippi paddlefish): 121317967
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Entry
121317967 CDS
T07273
Name
(RefSeq) protein NEDD1-like isoform X1
KO
K16547
protein NEDD1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121317967
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121317967
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
121317967
Microtubules and associated factors
gamma-tubulin ring complex
121317967
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
121317967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_like
eIF2A
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_LRRK2
Beta-prop_DCAF12
WD_LRWD1
KNTC1_N
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Frtz
Beta-prop_RIG_1st
Beta-prop_SCAP
Beta-prop_NWD2_C
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
121317967
NCBI-ProteinID:
XP_041110010
LinkDB
All DBs
Position
7:1406533..1423617
Genome browser
AA seq
653 aa
AA seq
DB search
MEESIRLVSSGEDIKIWNSSSMTVVDQFNPHASAHPVSRVCWSSNNHFLVSACASGDKIV
VSSCKSSPVPVLDLAEGKRQTCVNLNSTSQFIVSGGLDNTVNIWDLKSKKLHRSLKDHKD
VVTCVSFNGNDSYIASGSTSGEIILHSITTNLSSTPFGHGSTQPIQDLKYSYVKKSLMGS
VSDSGTVVLWDANTQKPQHTFEGAHKAPACGLCFSPANELLFVTVGLDKRIICYDTSSKK
VLRGMVAESPLTAIDFMPDGAVLAVGSSRGKIYLYDLRMLTSPVKTVSAHKTSVQCLKFQ
HSPSQTKSSSKTSASKSSTTLSASTYKRATVQSSTREALQKPAAPAAQHTSGTPASGERG
DGRQDNSAEMPRSTSLDVFPSKETDSLKSINRFPSLEKFDTVGRNSLSDVLSPVRDDYTT
QKGSGDCSKGDGLDFLSQFTSGLPARRAPLGTSEVQTSPFIMFGNSPQPVREEEEEEPKP
GRAQLGLQDTELSKISSSSTIEPVSMNTPGMLASFKSPDMRGKDVQTKLQYESPVNGALP
SVPILSPSPGVSAAGVASSLSERIADTIGSDSSSAPLTSIQIHFIRNMIQETLEDFRESC
HRDIVNLQVEMIRQFYIQLNEIHSLIERYSVTDVLVAEIEKLKEENKKLRTNF
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagtatccgcttggtgtcgtcgggggaggatataaagatctggaactcatcg
tcgatgacagtagtggatcagttcaacccccatgcctccgctcaccctgtctccagagtc
tgctggagcagcaacaatcatttcctggtcagtgcctgtgctagtggggataaaattgtg
gtatcgagctgcaagtcctccccagtccctgttctggaccttgctgaagggaaaaggcag
acctgtgtcaatttaaattccacgtcccagttcattgtgagtggtggccttgacaacacc
gtcaacatctgggatctgaaatctaagaagctgcaccgttccctcaaggatcacaaggat
gtggttacctgtgtgtccttcaatggaaacgatagctacattgcttctgggtcaacaagt
ggtgaaattatattgcacagcattaccaccaacctgtccagcactccttttggtcatggg
agcacacagcctatccaggatttgaaatactcgtatgtgaagaagtccctgatgggcagt
gtgtctgacagtggcacagtggttctatgggacgccaacactcagaaaccccagcacacc
ttcgaaggcgctcacaaggctccagcctgcgggctgtgcttctctcccgctaacgagctg
ctgtttgtcactgtggggttagataagaggatcatctgctatgacacttccagcaagaag
gtcctgcgaggcatggtggcagagtcccccctcactgcgatagacttcatgccggacgga
gcggtcctggcggtgggctcgtcccgagggaagatctacttgtatgatctcaggatgctg
acatctccagtgaagactgtgtctgcccacaagacgtctgtgcagtgcctaaaattccag
cactccccctcccagaccaagtcaagtagcaaaacttctgcaagcaagtcctccactact
ctgtctgccagcacctataagagagctacagtccagagcagcacaagagaggctctccag
aaaccagcagcaccagcagcccagcacacatccggtacaccggcatccggggagagagga
gacgggaggcaagataactcagcagaaatgcctcgcagcaccagcctggatgtcttccca
tcaaaagagacagacagtctgaagagcattaaccgcttccccagcttggaaaaattcgac
accgtggggagaaacagcctgagtgacgtgctctctccagtgcgagacgattacaccaca
cagaaaggaagcggagactgctcgaaaggagatgggctggatttcctctcacagttcacc
agtgggctgcctgcccgcagagctcctctggggacctccgaggtgcagaccagccctttc
atcatgttcgggaactccccgcagccagttcgagaggaggaggaggaggagcccaaacca
ggccgggcacagctgggactccaggacaccgagctgtctaagatttcaagcagctccacc
atcgagccagtgagcatgaacactccagggatgctggccagctttaaatctccagacatg
agggggaaggatgtccagacgaagctgcagtacgaatctccagtgaacggagcactgcct
tctgtgccaattttgagcccaagcccgggagtttctgctgctggagtggcttcctccttg
tcggagaggattgccgataccatcggcagtgacagcagcagtgcgccgctgacctccatt
cagatccacttcatcaggaacatgatccaggagacactggaagacttcagagagtcctgt
cacagggatattgtgaacctgcaggtggagatgatcaggcagttctatatacagctgaat
gaaatccactctctgattgaaaggtactccgttaccgatgtgctagtggcagaaattgaa
aagctgaaagaggaaaacaaaaaactcaggaccaatttctga
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