Polyodon spathula (Mississippi paddlefish): 121317983
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Entry
121317983 CDS
T07273
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121317983
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121317983
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
121317983
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121317983
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EZ
HEAT_EF3_N
HEAT_2
HEAT
TOR1L1_N
MMS19_C
UME
Adaptin_N
Cnd1
Vac14_Fab1_bd
CLASP_N
INTS7_N
mTOR_dom
RIX1
HEAT_DAAF5
ARM_ARMC5
VHS
Dcc1
V-ATPase_H_C
Vps35
Motif
Other DBs
NCBI-GeneID:
121317983
NCBI-ProteinID:
XP_041110036
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All DBs
Position
7:complement(1928585..1947609)
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AA seq
1231 aa
AA seq
DB search
MASASYHISNLLEKMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMILKLLEDK
NGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPA
SSGSALAASVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLCRQGGLLVNFHPSILSCL
LPQLTSPRLAVRKRTIIALGHLVMSCGNLVFVDLIEHLLAELSKNESMSTTRTYIQCIAA
ISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTVIAI
CLKYLTYDPNYNYDDEDEDENAMEADGGDEDYQGSDDEYSDDDDMSWKVRRAAAKCLDAV
VSTRHEMLPEFYKTVSPALIGRFKEREENVKADVFHAYLSLLKQTRPAQSWLCDPDAMEQ
GETPLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGI
IFSLNDRSSSSNLKIDALSCLYVILCNHTPQVFHPHVQAVVPPVVACVGDPFYKITSEAL
LVTQQLVKVIRPLYPQTSDFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICN
LGDSLGSDLPSTLQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPILGEGVPILASFL
RKNQRALKLSTLAGLDILMKNYSDSVTPAMIDAVLVELPPLISESDMHVSQMAISFLTTL
AKVHPASLSKISGSILTELIALVRSPLLQGGALGAMLEFFQALVATRTASLGYMDLLRML
TGPVYAQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLAL
LSLGEVGHHIDLSGQPELKSVILDAFSSTSEEVKSAASYALGSISVGNLPEYLPFVLQEI
SSQPKRQYLLLHSLKEIIGSASVAGLKPYVESVWALLLKHCECTEEGTRNVVAECLGKLT
LIDPETLLPRLKGYLLSGSSYARSSVVTAVKFTISDHPQIIDPLLKNCIGDFLKTLEDPD
LNVRRVTLVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGL
DIRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLARLSSLCPSAVL
QRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQ
SQISSNPELAAIFESIQKDSSSTNMECMDTS
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcctcctaccacatctccaatcttttggagaaaatgacatctagcgataag
gatttcaggttcatggccaccaatgatttgatgtctgaacttcagaaagattcgatcaag
ttggatgatgacagtgagcgcaaggtggtcaagatgatcctgaagctacttgaggataag
aatggagaggtgcagaacttggctgtcaaatgtctcggaccactggtcagtaaagtgaag
gagtatcaagtggagactattgtagatacactgtgtacaaacatgctgtcagacaaggaa
cagctgagggatatctccagcatcggcttaaaaacagtgattggagaacttcctccagct
tccagtggctctgctctagctgccagcgtttgtaaaaagattacaggtcgtcttacaagt
gccatagccaagcaagaagatgtctctgttcagttagaggccttagacataatggcagat
atgctgtgcaggcaagggggccttctggttaatttccacccatcaattctgagctgccta
cttccacagctgactagcccaaggctggctgtgaggaaaagaacaatcatcgctctgggc
caccttgtcatgagctgcgggaatctagtgtttgtggaccttatcgagcacctgctcgca
gagctgtccaagaatgagtccatgtcaaccaccaggacctacatacagtgcatcgctgca
atcagcagacaagcaggccatagaattggtgaatatttggagaagatcattcccctggtg
gttaaattctgtaacgtagatgatgatgagttaagggaatactgcatccaagcctttgaa
tctttcgtaaggaggtgcccaaaagaagtctatccccacgtttccactgttattgcaatc
tgtctaaagtacctgacctatgaccccaattacaactacgacgatgaggatgaagatgag
aatgcaatggaagcagatggaggcgatgaagattatcaaggaagtgatgatgagtacagc
gacgatgacgacatgagctggaaggtgcggcgcgctgctgccaagtgcctggacgctgtg
gtcagcactcgacacgagatgttacctgagttctacaagaccgtctcccctgcactgatc
ggcaggtttaaggagcgggaggagaatgtcaaagcggatgtatttcacgcgtacttgtcg
ctgcttaagcagactcgaccagcccagagctggctgtgtgatcctgacgccatggagcaa
ggggagaccccactgacgatgcttcagagtcaggttcctaacattgtgaaagcccttcac
aagcagatgaaggagaagagcgtgaagactcggcagtgttgcttcaacatgctaacggag
ctggtgaacgtgttacctggggcgctcacacagcacattcctgttctcgttccaggcata
attttctcactcaatgatagatccagctcgtcaaacctgaagatagacgctctctcctgt
ctgtatgtcattctgtgtaaccacacccctcaagtcttccaccctcacgtgcaggctgta
gtacctccagtagtggcctgtgttggggaccctttctataaaatcacatccgaggccctg
ctggtcacgcagcagcttgtgaaagtcatacgcccgctgtacccccagacatctgatttt
gacgcaacaccgtacattaaagatctcttcacttgcaccatcaagaggctgaaggcggca
gacatcgaccaggaggtgaaggagagggcgatatcctgcatgggtcagatcatctgcaat
ctgggagacagtcttggcagcgacctgcccagcaccctgcagatattcctggagcggctg
aagaacgagatcaccaggctcaccacggtgaaggctttgacactcattgctggctctccc
ctcaagatagacttgaggcctattcttggggagggggtgcctatcctggcctccttcctc
aggaagaaccagcgggcgctgaagctgagcaccctggctggcctggatatcttgatgaag
aattacagtgacagcgtgactccagccatgattgacgccgttctggtggagcttccgcca
ctgatcagcgagagcgacatgcacgtatctcagatggcgatcagtttcctcaccaccctg
gctaaagtgcacccggcctctctctccaagatcagtggctctatcctcactgaactgatt
gcgctagtgcggtcaccgctgctgcaggggggtgcccttggcgccatgcttgagtttttc
caggctctggtggccactcgtacagccagtctaggttacatggacctgttgcgcatgttg
acaggaccagtctacgcacagagcacagcacttacccacaagcagtcttattattccatt
gccaaatgcgtagcggcactcacgcgagcgtgccccaaagagggaccagcggtggttgga
cagttcatccaagacgtgaagaactcgaggtccaccgattccatccgcctcctggctctg
ctgtctctgggggaggtgggacaccacatcgacttgagcggccagcccgagctgaagtcg
gtcatcctggacgcattctcatccaccagcgaagaggtcaagtcggcagcctcctacgcg
ctgggcagcatcagcgtaggcaacctgccggagtacctgccttttgtcctgcaggagatc
tccagccagcccaaacggcagtacttgctcctccattccctgaaggagatcatcggctcc
gcctcggtggccggcctcaagccctatgtggagagtgtgtgggctttactgctgaagcac
tgcgagtgcacagaagaagggaccaggaatgtggtggcggaatgcctgggcaagctgacc
ttgatagaccccgagacactgctgccacgactcaagggatacctgctgtcaggttcttca
tatgcacgtagctcagtggtaactgctgtgaagtttacaatttccgatcacccgcagata
attgatcctcttctaaagaactgcataggcgatttcctaaagactttggaagacccagac
ctcaacgtaaggagagtgactcttgtcacattcaattctgcagcacacaataaaccttct
cttataagagacctcttagacacagttctccctcatctctacaatgaaacaaaagtcaga
aaggagctgatcagagaggtggaaatgggaccatttaaacacacagtggacgatggcttg
gatatccgaaaggcagcctttgagtgcatgtacacgcttctggatagctgtttagataga
ttggacatctttgaattccttaaccatgtagaagatggattaaaggaccattatgatatc
aagatgctgactttcttgatgctagctagactctcttcgctctgtcccagtgcggttctg
caaagattggacaggctagtggaaccattgcgagctacatgcacaactaaggtgaaggcc
aactcagtgaagcaggagtttgagaagcaggatgagctgaagaggtcggccatgcgggca
gtagcagcactcctgaccattcctgaagcggagaagagtccactaatgagtgagttccag
tctcagatcagctccaaccccgagctggcagccatcttcgagagcatccagaaggactcc
tcctccactaacatggagtgcatggacaccagttaa
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