Polyodon spathula (Mississippi paddlefish): 121318001
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Entry
121318001 CDS
T07273
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121318001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121318001
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
121318001
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
121318001
NCBI-ProteinID:
XP_041110086
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Position
7:3046842..3062014
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AA seq
713 aa
AA seq
DB search
MIRKRQCKSIFGHSQLESSQKTQTCSGKMTVEMRPEGFPDPPLKKELPPLEDPSEAKTRT
CCTRNVKMFLVALSFTYFSKTLSGSYMKSSITQIEKRFEIPSSVIGVIDGSFEMGNLLVL
PLVSYFGAKFHRPKIIGAACMLMSIGTLLTALPHFLMGHYKYETTISASTNSSTVSFPCS
QDPGQLTELQAQQQSSRIAGCEHDRGSLMWVAVLLGNMLRGVGEASIAPLGISFIDDFAR
PENSAFYIGCLHTIALIGPLFGFMLGAFCARLYVDIGFVDLGSIAISMKDSRWVGAWWLG
FIVAGGTSLVSAFPFFFLPKTLPKEGGPEKDSSVTAEQNLLQGNQQTDSTDEQPKIIDVA
KGFLPALKRLLTNKIYVFYLILNILMFNAFIVLITYTPKYFEQQFGESTSKANFLIGVTS
MPAFSMGIFFSGLIMKKFKLDLLGAAKVALGTATLGCLCTLPLFALTCHNAEIAGLTVSY
AGTGISDLESRVSVACNSGCGCPVNQWEPVCGENGMTYISPCFAGCNISRGSGRNTTFHA
CRCIEAFPKPGSGNFSALLGQCPREEKCSRMFIYYLAFQSLSFFIFSLGSTPLYIISLRC
VDPDLKSLSVGILAMAVRLLGGIPAPIYFGALIDSTCIKWGTKKCGGHGACRVYNNVSFR
LLFLGLILGLRLIGYVFFGFVIVQIKKLTRDHRKASPEVEVFLKQDQKNNVLP
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaaaacgccagtgtaaaagcatatttggccacagtcagttggagagctcacag
aaaactcaaacctgttcaggaaaaatgacagtggagatgagaccagaggggtttcctgat
cctcctttaaagaaagaactgcctcctcttgaagatccatcagaagcaaaaacaagaaca
tgctgcactcgcaatgtaaagatgtttttggtagctctatcgtttacatacttttccaaa
acattatctggaagttacatgaaaagctccattacccagatagagaagagatttgagatt
cccagttctgttattggggttattgatggcagctttgaaatgggtaatttgcttgtgttg
ccattggtaagctactttggagcaaagtttcacagaccaaaaataatcggtgctgcatgc
atgctgatgtctattggaactttactcacagcgctacctcatttcctcatgggacactat
aaatacgaaacaacaatatcagcttcaactaactccagcacagtgagcttcccgtgttca
caagacccaggccagcttacagagcttcaggcccagcaacaatcttccagaatagctggt
tgtgaacatgatagaggctccctgatgtgggttgctgtgctgctggggaacatgctacga
ggggttggtgaagcatccattgcaccactgggaatttcattcattgatgattttgccaga
ccagaaaactcagccttttacattgggtgcctccataccattgcattgattggacctctt
tttgggttcatgctgggtgcgttttgtgcaaggctgtatgtagacattgggtttgttgat
cttggaagtattgccatatcaatgaaggattcccgttgggtcggtgcttggtggcttggc
tttatagtcgctggaggaaccagcttggtttctgcatttccattcttttttctgcccaaa
actctgcccaaagaagggggtccggaaaaagattccagcgttacagcagaacaaaatctg
ttacaaggaaaccagcaaacagactcaacagacgagcaacccaaaatcatagatgttgca
aagggttttttgccagctttgaagcgtctgctcacaaacaagatctatgtattctatcta
atcttgaacattctaatgttcaatgccttcattgttttgataacttatacaccaaaatat
tttgaacaacagtttggagaatccacatccaaagcaaactttttaataggtgttaccagc
atgccagctttttccatggggattttcttcagtggtcttatcatgaagaagtttaagcta
gatctcctgggagctgccaaggtagccctgggtacagccacccttggctgcctctgtacc
ttacctttatttgcattaacctgtcacaatgctgagatcgctggactcacagtttcctat
gcaggaacagggatttcagacttggagagcagagtgtcggtggcctgtaactctggctgt
ggttgcccagtgaaccagtgggagccagtgtgcggagagaatgggatgacgtacatttcc
ccttgctttgctggctgtaacatatccagaggaagtggaagaaacacgacgtttcatgcc
tgcaggtgtattgaagcttttcctaagcctggatctgggaatttctcggcacttctgggc
cagtgcccgcgagaggagaagtgttccagaatgttcatatattacttggcgttccagtcc
ttgagcttcttcattttctctctgggaagcacaccactgtacattatatccctcaggtgt
gttgatccagacctgaaatcattgtctgtgggcatcctcgcaatggcagtccgattgctg
ggtgggatcccagctccaatttattttggagccctgattgactcaacatgcataaaatgg
gggaccaagaagtgtgggggtcatggagcatgcagggtgtataacaacgtctcattcagg
ctcctcttccttggattaatattgggcctgcgcttgataggttatgtcttttttgggttt
gtcatcgttcagataaagaaattaacaagagaccacagaaaagcttcacccgaagtagaa
gtctttttaaagcaggaccagaaaaacaacgtccttccttag
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