Polyodon spathula (Mississippi paddlefish): 121318026
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Entry
121318026 CDS
T07273
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta-like isoform X1
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121318026
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121318026
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121318026
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121318026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
PTP_tm
SdrD_B
Glyco_hydro_66
Ricin_B_lectin
DSPc
PTPlike_phytase
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
121318026
NCBI-ProteinID:
XP_041110157
LinkDB
All DBs
Position
7:complement(4189495..4236379)
Genome browser
AA seq
2536 aa
AA seq
DB search
MDALFLVGILAFLPLPSSEGFLIAHVHKGLCLLNNIVLVKLGTCNATSPSQQWKWTQEDK
LLHVHSSRCLWADISSSLPSHARLASLGNCSAAPSWSSCEAAGLLGVADSPLYLKKQGPR
VVVKTGKRYSNWTKYEVDPGGKVVTGSLCAKKGPVKLETITEFLPSTAKSYISTVAATST
IVATSTITAAATTTKAPDTSTITNKRTKAATSTSAATSTVAPTTTIAAASTLAAAPTTTK
ASVTSTIKTKSTRVATSTSAATSTIAATSTIESAATTVKAPVTSTIKTKNIGTSSATRTV
AATNTIATTSTFAATSRSPIGATSATANTTAATRTISVTTTSTKAATSTNAATNSSSAAN
TIAATSSGSVTSTDTAASTVIAASTDTAASTIIAASTVTGASTDTAASTIIAAATVTGAI
TVTGASTDSAASTIIAASTVTGASTIIAASTVTAASTCIAASTITGAGTVTAVAMSTSTI
TNSSTTASTNKIIKILKSLFASNTETVAPSTPENPTVFSTKTDPLHGLTSTQTTGAPLST
TDYTSDTTYTTEQYTTADPVKCTVNLTETRIATDSVFFQWTSAGRSCNFSVIHTCNNSRT
ANCARTIGYNDSYECEVRNLEPGTAYDLGILSSTDGELTNISLQTDPKEPENFNINQETL
SSTSLQVQWTASPGHVGWYNVSLLGTDTGQKQSVLVPGGASSEATFTSLVPGSRYTASIT
AVAGHKTSAALRTAGATVPCAVQNLQLSRVPGGLSAFWQHGLGKVDRYRVLLKDNKSVVL
NLTLERSATTYTFPGLTSGHLYNLTVITEASGLHNESFKLARTAPAKVSDLKVSNNGSLD
TLTATWSRAAGDVESYTVTLSDNSAAPQGRSLPPGTSQAVFSGLVSGRLYQVTVSTRSGE
LQSEVVATSRTVPQKVSQLELRALQGWQNALRVTWAPPAGEWENYRILLLNNSVAIVNST
VDKNTRQYEMRNLGLIPGRLYQATVIVESGNLKSIAKCEGRTAPHPVLQLSVKHADETSL
SVTWATPRAEWDGYLVTLKHRDSTVIETNLQKHLKEYTFSDLVPGRKYTVLVTTNSGELS
NWTSVEGRTVPSQVTNLTISNQGTTDSLHATWARARGDIESYRVLLIHESIVIKNESVSA
DTTSYHFHSLKPGSLYGVVVTTVSGVIPSRQTVAEGRTVPSAVGEVTVSNNGRTDFLSVS
WQPASGDVDSYLVTLSNHERAVHTVTVSKTNSKCDFSSLIPGHLYNISITTRSGIYENHT
FVQERTRPSKVQYLRASNSARSDYLIVSWHNATGDFDNYQVIIKSSNDFIQTTTIPKSQN
ECVFHSLVPGRLYIITVSKRSGKYEASETTNARTFPAAVRMLTLADRHTEDLRVTWSPAP
GDVDRYEIQLLFNDMTVFPSITLSNTAREYQFTSLVPGRLYKIVVLSFSGDQQRSEFVEG
RTVPSMVKNILVSNNGEMNSLKINWTPGGGDVDSYTVTLFQQSRLISSHTVPKLVLEHSF
HQLQAGELYNIMVQSNSGHLHNNNTAPGRTVPASVTGLVADNKHTSCSLVVSWQAAAGVA
EGYKLELLHEEKSLIANSSVSASARQHRFNELTPGKKYQVRVITVSGMLYSKGALTEGRT
VPAAVSGLMITGNGTESLSFGWETSEGQFDAYEIFLYNPDDTLHDRKSGTASLRQCLFHG
LLPGRMYKMAIVTRSGDLTNETSIHGRTVPAPVTGLHGLNKNQSDSLWFTWNQAAGDLSG
YEISLHNPNGTLQDQLHGNKALRECLFQHLIPGRLYTLVIATKSGYLTNKATAEARTAPR
PPKSVSFADVTNTSLEISWTAPEDTDYEDFELQCSPQDPLSVINPYQIGRSGSRILRGLY
PGRLYNISVRTVSGTPQTNRAYSQPIYEAIRTKPERIQHIHCRPQNSTAISCSWSPPQSD
YDGYSIECYHQGSRELVYSRRTGKDSSPYNIARLEPHKRYIVSVKVLSDKMVSRAVEDSV
ITMIDRPPLPPDSMRVNEKAVKITKSTIFFKFNCSWFSDVNGAVKYFTVIVSEADGVEHV
QLGQHHPLPSYTDYKLNASIKAYQTNFFASRCAENPDNSIQSFEINVGTGLESLGGKCEP
QQQRFCDGPLKPRTAYRISIRAFTQLFDGEQKEFAQPLFTDTHFSEPITTESEPLIGVVE
GISAGLFLIVMMIGVSVLLICRQKARKINMQERPRMSARRERPASVSMHVGVKGNRRISS
PITISQFESHFTKLQADSNYLLSEEYEELKDVGRNQSLDTALLPENRGKNRYNNILPYDT
TRVKLSYVDDDPCSDYINASYIPGCNSRREYIATQGPLPGTKDDFWKMVWEQNVHNIVMV
TQCLEKGRVKCDHYWPFDQDPLYYGDLIVQMLSESVLPEWTIREFKICSEDQVNVSRVVR
HFHYTVWPDHGVPETTQSLIQFVRTVRDYINRTPGSGATVVHCSAGVGRTGTFISLDRVL
QQLDSKDTVDIYGSVSELRLHRAHMVQTECQYAYLHQCVRDVLRARKLRNDQENPLYPIY
ENVNPEYHRDMVYARR
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgctattcttggttggaatattggcgtttctgcctttaccttcttcggagggt
ttccttattgctcacgtccacaaagggctgtgtctgttaaacaatattgtgctggtgaag
ttggggacgtgcaatgcgacgagtcccagtcaacagtggaagtggacacaggaagacaag
cttctccacgtccactcgtccaggtgcttgtgggcagacatctccagctccctgcccagc
cacgctcgcttggcctcccttggtaactgttctgccgcaccgagctggagctcctgcgag
gcggcgggtcttctcggggtagcagacagccctctctacctgaagaaacagggaccgcgt
gtcgtcgtgaagaccggaaagaggtattcaaactggaccaagtacgaggtcgaccccggg
ggaaaggtggtcaccgggagtctgtgcgcaaagaaaggtcctgtcaaactagaaactatc
acagaatttctcccaagtacagctaaaagttatataagcactgtagcagccacaagcact
attgtagctacaagcaccattacagctgcagctacaaccacgaaagccccagacacaagt
actattacaaacaaaagaacaaaagcagccacaagtacaagtgcagccacaagcactgtt
gcacccacaaccactattgcagctgcaagcacgcttgcagctgcacctacaaccacgaaa
gcctcagtcacaagtactattaaaaccaaaagcacaagagtagccacaagtacaagcgca
gccacaagcactattgcagctacaagcacaattgaaagtgcagctacaaccgtgaaagcc
ccagtcacaagtacaattaaaaccaaaaacataggaacaagttcagctacaagaactgtt
gcagccacaaatactattgcaaccacaagcacatttgcagccacaagtagaagtcctatt
ggagctacaagtgcaactgcaaatactactgcagccacaagaacaatttcagtcacaacc
acaagcacaaaagcagccactagtactaatgcagctacaaattcaagttcagctgcaaat
actattgcggccacaagctctggtagtgtgacaagcactgacacagctgcaagcactgtt
atagctgcaagcactgacacagctgcaagcactattatagctgcaagcactgtcactggt
gcaagcactgacacagctgcaagcactattatagctgcagccactgtcacaggtgcaatc
actgtcacaggtgcaagcactgactcagctgcaagcactattatagctgcaagcactgtc
acaggtgcaagcactattatagctgcaagcactgtcacagctgcaagcacatgtatagct
gcaagcaccatcacaggtgcaggcactgtcacagctgtggcaatgagcactagtacaatt
acaaactccagtacaactgcaagcacaaataaaattataaagatcctgaaatcccttttt
gcttctaacactgaaacagtcgctcccagcacccctgaaaaccccacagtattcagcact
aaaacagatcctctccatgggctgacttcgacccaaactacaggagcacctttgtcaact
acagactacacctcagacaccacctacacaactgaacagtataccactgctgatcctgtg
aaatgcaccgttaatctgactgagactagaatcgccacagattccgtcttcttccagtgg
acgagtgctggaaggtcatgcaatttcagtgtcatacacacctgtaacaattccagaact
gcaaactgtgctcgaacaataggatacaacgactcgtatgaatgcgaggttagaaatctg
gaacctggaaccgcatatgacctggggatattgtcttccacggatggagagctgacaaac
atctcacttcagacagatcccaaggagccagaaaactttaacatcaatcaggagaccctc
agcagtactagcctgcaggtgcagtggacagcgtctcccggccatgtgggctggtataac
gtcagtctactaggcacagacacaggccagaagcagagtgtactggtcccagggggtgcc
tcctcagaagccacattcaccagcctggtgcctggcagccgctacactgcgagcataact
gctgtggctggacacaagacctcggctgctctccgcactgccggagctacagttccctgt
gctgtgcagaatctccagctctccagagtcccaggcggcctgtctgctttttggcagcac
ggtttagggaaggtggacagatacagagtgctgctgaaggataacaagagtgtggttctg
aacttgactctggagagaagtgccaccacctataccttcccaggactgacctcgggacac
ctctataatctcactgtaatcacagaggcctcgggactgcacaatgaatccttcaaactg
gccaggacagcaccagctaaagtctcagatctgaaagtttcaaacaatggcagcctggat
accttaactgctacctggagcagagcagcaggagatgtggagtcctacactgtgacgctg
tcggacaacagtgcggccccacaagggaggagcctgcctccaggcacctcccaagctgtg
ttcagtggattagtatctgggcgcctttatcaagtcactgttagcaccagaagcggtgaa
ttacaaagtgaggtagtggccacaagcagaactgtccctcagaaagtttcccaattggag
ctacgggctcttcaggggtggcagaatgctctgagagtgacgtgggctcctcctgctggt
gaatgggagaactaccgtattctgctgctcaacaactccgttgccatagtgaacagcaca
gtggacaagaacacaagacagtacgagatgagaaacttgggcctcatcccggggcggctc
taccaggcaacggttattgtggagagcggaaacctgaagagcattgctaagtgtgaaggc
agaacagctccccaccctgtcctgcagctcagtgtcaagcatgctgacgagacgtctctg
agcgtgacgtgggccacccccagagcagagtgggacgggtacctggtcaccctgaagcac
agggacagcacggtgatagaaacgaatctacagaaacacctgaaggaatacaccttcagt
gatctggtaccaggaaggaaatacacagtccttgtgacaaccaacagcggggaactgagc
aactggacatcagtggaggggagaacagttccatctcaagtcaccaacctgaccatcagc
aaccagggcacaacggacagcctgcacgccacgtgggcacgggcgcggggcgacatcgag
tcctaccgggtcctgctcatccacgagagcatcgttatcaagaacgagagtgtgtcggca
gacaccaccagctaccacttccactccctcaaaccaggcagcctctacggggtggtcgtc
actactgtcagcggggtcatcccctctcggcagactgtggcagagggaaggacagttccc
tctgcagtgggtgaagtcacagtgagtaacaatgggaggactgatttcctcagtgtctcg
tggcagccggcctctggggatgtggacagttacctggtgaccctgagcaaccatgagaga
gctgtgcacaccgtcacggtgtctaaaaccaacagcaagtgtgacttcagctccctgatc
ccggggcacctctacaacatctccatcaccacacgcagcgggatctatgagaaccacacc
ttcgtgcaggagcgcactcggccttccaaggtacaatatttgagagccagcaactctgca
agaagcgactacctcatagtgtcctggcacaacgcgacaggggacttcgacaattaccaa
gtgatcattaagagcagcaatgacttcattcagaccactaccatccccaagtctcagaac
gagtgtgtgttccattccctggtccctgggagactgtacatcatcactgtcagcaagaga
agcgggaagtacgaggcgagcgaaacaaccaacgcacgaacgttcccagccgcagtgagg
atgctgactctggcagacaggcacaccgaggatctgcgggtcacctggtcccctgctccc
ggggacgtggatcgatacgagatccagctcctcttcaatgacatgacggtgttcccttcg
ataacgctgagcaacactgccagggagtaccagttcacctcgctcgtgccggggcggctc
tacaagatcgtggtgctgtccttcagcggggatcagcagcgctcagagttcgttgagggt
cgtacagtccccagcatggtgaagaacatcctggtctccaacaatggggagatgaacagt
ctgaagatcaactggacgcccgggggaggggatgtagacagctacaccgtgaccctcttc
cagcagagccggctgatctcctcacacaccgtccccaagctggtgcttgagcacagcttc
caccagctgcaggcaggcgagctatacaacatcatggtccagtccaacagcggccatctg
cacaacaacaacacagcccccgggaggactgttccagcctctgtgacgggcctggtcgcc
gataacaagcacaccagttgcagcctggttgtgagctggcaggctgctgcaggagtggcg
gagggatacaagctggagctgcttcacgaggaaaaaagcctcatcgccaacagttccgtg
tctgcctctgcccggcagcacaggttcaatgagctgacccctggcaagaagtaccaggtc
cgagtgatcactgtcagtggtatgctgtacagcaagggggcgcttaccgaaggaagaaca
gttccagcagcggtcagtgggttaatgatcaccgggaatggcacagagagcttgtctttt
ggctgggagacctccgagggacagttcgatgcctacgaaatattcctgtacaaccctgac
gacactcttcatgaccgcaaatctgggacagccagcctgaggcagtgcttattccatggg
ctgctgccagggagaatgtacaagatggcaatcgtgacgcgcagcggggatctgaccaat
gagacctccattcatggaaggacagtcccagccccagtgaccggactgcacggtctgaac
aaaaaccagagcgacagcctgtggttcacctggaaccaggctgcaggagacctctccgga
tacgagatatccctgcacaaccctaatggaacactgcaggaccagctccatggcaacaaa
gccctgcgagagtgcctgttccagcacctgatcccggggaggctgtacacattggtcata
gccaccaagagcggctatctcaccaacaaagccaccgcagaggcaaggacagccccacgg
ccacccaagtccgtgtcatttgcggacgtcacaaacacgtcgctggagatctcgtggaca
gccccagaagacaccgattacgaggactttgagctgcagtgttctccccaggatcccctc
tccgtgatcaatccttaccagatcggcaggtccgggagccgcatcctccgagggctctac
ccggggcggctctacaacatcagcgtgcgcacagtcagcggaaccccccagacaaacagg
gcctacagccagcccatctacgaagccatacgaacaaaacccgaacgcattcagcacatc
cactgccggccccagaactccacggccatctcctgctcctggagcccccctcagtcagac
tacgacggctacagcatcgagtgctaccaccagggctcccgcgagctggtgtactcgcga
cgtaccggcaaggacagctcgccctacaacatcgccaggctggagccacacaagcgctac
atcgtctccgtcaaggtgctgtccgacaagatggtcagcagagcggtggaagacagcgta
ataaccatgattgaccgtcctcccctcccaccagacagcatgcgagtgaatgaaaaggcg
gtgaagatcaccaagtccacaatcttcttcaagtttaactgcagctggttcagcgacgtc
aacggggcggtgaagtacttcactgtgatagtgagcgaggcagacggcgttgaacatgta
cagctgggtcagcaccaccccttgccctcatacacagactacaagctcaacgcttccatt
aaagcctaccagaccaatttctttgccagccgttgcgctgaaaaccctgacaacagcatc
cagagctttgagataaatgtggggacagggcttgagagcctcggagggaagtgcgagcca
cagcagcagaggttctgcgacgggcctctcaaacccaggactgcctacaggatcagcatt
cgagcattcacgcagctttttgacggggaacaaaaggagttcgcccagcccctctttaca
gacacccatttctctgagcccataaccactgagtcagagccgctaataggcgttgtagag
gggatcagtgctggcttgttcctgattgtgatgatgattggtgtgtctgttctgttgatt
tgtcgtcaaaaagcaagaaaaataaatatgcaagaaaggccaagaatgagtgcccgaaga
gagagaccagcgtcggtcagtatgcatgtgggagtgaaaggtaatcgacgcatctcaagc
cccatcacaatctcccagtttgaaagccatttcaccaaactgcaggctgattccaactac
cttctttcagaggagtacgaggagctaaaagatgttggtcgaaaccaatcccttgacaca
gcacttttacctgagaacagagggaaaaatcgttacaacaatatactgccctacgacaca
acccgggtgaaactttcctacgtggacgacgatccctgctctgactacatcaacgccagt
tacattcctggctgcaactctcgaagagaatacatcgccacacaggggcctctgcctggc
acaaaagatgacttctggaaaatggtgtgggagcaaaacgtccacaatatcgtcatggtg
acccagtgtttagagaagggaagggtgaagtgtgatcactactggcctttcgatcaggat
cccttgtattacggagatctcatcgtccagatgttgtcggagtctgtcttacccgagtgg
accatccgcgagttcaagatctgcagtgaggaccaggtgaacgtcagcagggtggttcgt
catttccactacacggtgtggccggatcacggcgtccctgagactacccagtctctgatc
cagtttgtccggactgtgagggattacatcaaccgcaccccgggctccggagctactgtg
gtgcactgcagtgccggtgtgggaaggacaggcacgttcatctccttggacagggtcctg
cagcagctcgactccaaggacaccgtggatatttatggttctgtctctgaactgagactt
cacagagctcacatggtgcagacggagtgccagtatgcatatttacaccagtgcgtcaga
gatgtcttgagagcaaggaaactacggaacgaccaggaaaacccgctgtatcccatctat
gaaaatgtcaatcctgagtatcacagagacatggtgtacgcaagacgttaa
DBGET
integrated database retrieval system
