Polyodon spathula (Mississippi paddlefish): 121318027
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Entry
121318027 CDS
T07273
Name
(RefSeq) receptor-type tyrosine-protein phosphatase R-like isoform X1
KO
K04458
receptor-type tyrosine-protein phosphatase R [EC:
3.1.3.48
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121318027
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121318027
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121318027
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121318027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Tc-R-P
DSPc
PTP-SAK
Y_phosphatase3
PTP-NADK
WBP-1
FAZ1_cons
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
121318027
NCBI-ProteinID:
XP_041110161
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Position
7:complement(4239262..4291003)
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AA seq
659 aa
AA seq
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MQGGRGFMVVVCMLFRLKIAGCFSGDQEDFLTIHQRRSERPLVFYPPAEEGIEKSVELDG
LGVQRNLFHSLSRARISKLHPTMIVKSTFLQASHDQSISLLARIDQDLEIENEPVSDEHL
IIVTLQTDIRKLNNTLLQTFRRGVAAALDISPQQVHINRLNEKKNCIELTVSPPPDKLGT
MERLSSEEVVRSLNVNILHKSLSQFGITEITPEKNVLQGQHDRDKVWTKEGFYAVAIFLT
IFVIIITCLMVLYRLKEKTEFPDQRYKEQSREIHLAPIPLPTKNPEVQIFNSMVQPETVP
RSESISANPQSQPAPEMKPCLSCSPSPFRIKSAGLQERRGSNVSLSLDMSVLGSVDPFSA
APAPRERVAMEYLQSAHRALSRQQLREATLHTQQLHAEFTEIPMNFVDPKELDIPSHGTK
NRYKTILPNPHSRVCLKTKSIYDPLSSYINANYVRGYMGEEKTYIATQGPMINTVNDFWQ
MVWQEDSPVIVMITKLKEKNEKCVLYWPERRGIYGKVEVLINSVRECDHYTIRSLTLKQG
GQCCSVKHYWYTSWPDHKTPDSAQPLLQLITEVEEERKASAGRGPVIVHCSAGIGRTGCF
IATTTGCRQLKQEGVVDVLSITCQLRVDRGGMVQTGEQYEFIHHTLSLYESRLSADADQ
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcggacgcggcttcatggtggttgtatgtatgttgttccggctgaagattgca
ggctgcttttctggagaccaggaggacttcttgacaatacaccagcgaaggtctgaaagg
ccccttgtcttctatccgcccgcagaggaggggattgagaagagtgtggagctggatggt
ctcggcgtgcagagaaaccttttccattccctttcacgtgccaggatcagcaaattgcac
cccacaatgatcgtaaaatccacctttctgcaagcatcccatgaccagagcatcagtctg
ctcgccagaattgatcaagacctggagattgaaaacgaaccagtgtctgatgaacacttg
atcattgtgacgctgcaaacggacatacgcaaactgaacaatactctgctgcagactttc
cggagaggggtggctgcagccttggacatctctcctcagcaagtgcatatcaaccgtctt
aacgaaaagaagaactgtatagagctgacggtgtctcctccgcctgacaaactgggcacc
atggagagactgtcctctgaggaagtggtacgttctctcaacgtgaacatcctccacaag
agcctgtctcagtttggcattacggagatcaccccagagaaaaatgtgctgcaaggacaa
catgacagagataaagtgtggaccaaagagggattttatgctgtggctatttttctcact
atctttgtaattattatcacatgtttaatggtcctgtaccggctgaaggagaaaactgag
ttccctgatcagcggtacaaggagcagagccgggagatccacctggcccccatccccctg
cccacgaagaaccccgaggtgcagatcttcaacagcatggtgcagcccgagacggtgccc
agatctgagagcatcagtgccaacccccagagccagcctgcacccgagatgaaaccctgc
ctgtcctgcagcccctcacccttcagaattaaatctgctggtctccaggagaggcggggc
tccaatgtatctctcagcttggatatgagtgtcttgggcagcgtggaccccttcagcgcc
gcgcctgccccccgggagagggttgccatggagtacctgcagtctgcacaccgggccctg
agcagacagcagctccgcgaggctacgctccacacccagcagctgcatgcagagttcacg
gaaattccaatgaattttgtggatcccaaagaactggacattcccagtcacggaaccaaa
aaccgatacaagaccattttgccaaacccacattccagagtgtgtctgaagaccaagagc
atatatgatccactcagctcttacatcaatgctaactacgtcaggggctacatgggagaa
gagaagacctacattgcgactcagggccccatgattaacacggtgaatgatttctggcag
atggtctggcaagaggactctccggtcatcgtcatgatcacaaagctgaaagagaagaac
gagaaatgcgtactctactggccagaaagaagaggcatatatgggaaggtggaggtcctt
ataaacagcgtccgtgaatgtgatcactacaccattcgtagcctgaccttaaagcaggga
ggccagtgttgcagtgtgaaacactactggtacacgtcctggcccgaccacaagaccccc
gacagtgctcagcccctcctgcagctcatcacagaggtggaggaggagaggaaagcatca
gccggcaggggtcctgtcattgtgcattgcagtgctgggataggaaggactggctgcttt
attgccacaacgaccggctgtcgtcagctgaagcaggaaggggtggtggacgtgctttcc
atcacctgccagctccgggtagacaggggaggcatggtccagacaggcgagcagtacgag
tttatccaccacaccctgagtctctacgaaagcagactctcagccgatgctgaccagtga
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