Polyodon spathula (Mississippi paddlefish): 121318029
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Entry
121318029 CDS
T07273
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5-like isoform X1
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121318029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121318029
G protein-coupled receptors [BR:
pspa04030
]
Rhodopsin family
Others
R-spondin
121318029
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
7tm_1
LRRNT
LRR_LRWD1
LRR_EndoS
LRR_R13L1-DRL21
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
121318029
NCBI-ProteinID:
XP_041110165
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Position
7:4345197..4410208
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AA seq
906 aa
AA seq
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MLHPPFLDSFLVTLLLLLAAAGGGTEAGKPQRDCPSICHCEEDGMLLRVDCSDLGLTALP
ANLSVFTSYLDLSMNNITQLPASALFNLHFLEELRLAGNDLTHIPKGALSGLFNLKVLML
QNNQLRQVPSEALQNLRNLQSLRLDANHIYSVPHNSFSGLSSLRHLWLDDNSLTEVPVQA
LSSLSSLQAMTLALNKITRIPDYAFANLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDL
NFNNLDEFPTAIKALINLKELGFHSNNIRSIPERAFMENPSLITIFFYDNPIQFVGKSAF
QHLPELRMLSLNGATEITEFPDLTGTKSLESLTLTGARISALPAEMCEQLPNLQVLDLSY
NLIQHLPTFNGCERLQKIDLQHNEIQEIQTNTFQHLTALRSLDLAWNKICAVDPNAFSHL
PSLIKLDLSSNLLSSLPVTGLHGLTHLKLAGNTDLQDLLSAENFPKLRVMEMPYAFQCCA
FVSCENHNKLSNPWDKNETRSTDHFVKKDSGILLSQEDHDFEDYLLDFEEDPKAHHSVQC
TPAPGPFRPCDHLFGSWLIRTGVWIIVVLSLVCNGLVAVTVFVSPTYISPAKHLIGLLAV
VNSLMGLSSGVLAVVDALTFGSFAKYGAWWESGIGCRITGFISVFSSETCIFLLTTAALE
RGLSIKCAKRLESKSTKSNVKIVSAFCFILALAITVLPLLHVGEYGISSLCLPLPFGEPS
SLGFMVALVLLNSLCYFVMTVTYTRLYCSLEKGELDNFWDCSMIKHVAWLLFTNCFLYFP
IAFLSFSSLLNLSFISPEVIKSILLVIVPLPACLNPLLYMLFNPHFKEDLGILLKQTRLL
KKSKQSSLISLNSEDAEKQSCDSTQALVTFKRSENLGDAPESKSVSSASQIIEACPSQSA
TSVPYH
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatcctcctttcctcgacagctttttggtgacactgttgctgctgctagcagct
gctggagggggaaccgaagccgggaagccgcagagagactgcccgtctatttgtcactgc
gaggaggatggcatgctcctccgagttgactgctcggacctcgggctcacggctctgccc
gcaaacctgagcgtcttcacatcgtaccttgatctcagcatgaacaacatcacccaactg
cccgcgagtgccctttttaacctccacttcctagaagagctacgtcttgcaggaaatgac
ttgacacacatccctaagggagccctgtctggccttttcaatcttaaagtgctaatgcta
cagaacaatcagttaagacaggtccctagcgaagcactgcagaatctccgtaatctccag
tctctccgtttggatgccaatcacatctacagcgtaccgcacaacagcttctctggcttg
agctccctgcggcacctctggctagatgacaactccctgacggaggttccagtgcaggct
ctcagcagcctgtcctccctgcaggccatgacgttagccctgaataaaataacacgcata
cctgactatgccttcgcaaacctttccagtctggttgtcttacatctccataacaataga
attcactccctgggaaagaaatgctttgatgggctccacagccttgagactttggattta
aactttaataatctggatgaatttccaactgccatcaaagccttgatcaatcttaaagaa
cttggttttcatagcaacaacatcaggtcgatcccagaaagagcttttatggaaaaccct
tctctcataacaatatttttctatgacaaccctatccagtttgttggaaaatctgctttc
cagcacttacctgaactgagaatgctgtcactaaatggagccacagaaatcactgagttt
cctgacctcacagggaccaagagtctggagagcctgaccctgaccggggcgcggataagc
gctcttcccgcagagatgtgcgagcagttaccgaaccttcaagttctagatctgtcttac
aacctgatacagcacttgcctacttttaatggttgtgaaaggctccagaaaattgacctg
cagcacaacgaaattcaagaaatccagaccaacacgtttcagcacctgactgctctgaga
tcgcttgacctggcttggaacaagatatgtgcggttgatcccaatgcattctcccatctg
ccttcgttaatcaagctggatctctcatctaacctcctctcctctcttcctgtcactgga
ctgcatggattaacacaccttaaattagcaggcaacacagacctccaggatctattatct
gcggaaaactttccaaaactgagggttatggagatgccgtacgctttccagtgctgtgca
ttcgtatcctgtgaaaatcacaacaaactgtccaatccttgggacaaaaacgagacccgc
agcaccgaccattttgtcaagaaggacagcggcattctgctcagtcaggaagatcatgac
tttgaggactaccttcttgactttgaagaagacccaaaagctcaccactcggtccagtgc
accccagcaccaggtccattccggccctgtgatcacctgtttggcagctggctaattcgc
accggagtgtggattatagtggtgctgtcacttgtgtgcaatggtctggtggctgtaact
gtctttgtttcgccaacctacatatctccagctaagcacctcatagggctgcttgcagtt
gtcaacagcctaatggggctttcaagtggcgttctggctgtcgtcgatgccttaaccttc
ggcagctttgccaaatacggggcgtggtgggaaagcggaattggctgcaggatcacaggg
ttcatatcagtcttcagctctgagacgtgcatctttttactgacgaccgctgcgctggag
cgtggcctctccataaagtgcgccaaaagactggagtccaagtccaccaagagcaatgtc
aagatcgtttccgctttctgcttcatcctggctttggccatcactgtcctgcccctgctc
cacgtgggcgagtacgggatctcctccctgtgtctgcctttgccttttggagagccgtcc
agcctgggcttcatggtggccttggttctgctcaactcgctctgctatttcgtgatgacc
gtcacctacaccaggctgtactgcagcctggagaagggcgagctggacaacttctgggac
tgctccatgatcaagcacgtggcctggctgctcttcacaaactgcttcctttacttcccc
atcgccttcctgtccttctcctccctgctcaacctgtccttcatcagtcccgaagtgatc
aagtccatcctccttgtcattgtcccacttccggcctgcctgaaccccttgctttacatg
ttgttcaacccgcacttcaaggaggacctcggcatcctgctaaagcagacacggctgtta
aagaaatccaagcagagcagcttgatctccttgaactcggaggatgcagagaagcagtct
tgcgactccacccaggcgctggtcaccttcaagaggtcggaaaacctgggtgatgcacca
gagagcaagtctgtctcgtctgcctcccagatcattgaagcgtgcccctcccaatcagcg
acgtctgttccctaccactag
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