Polyodon spathula (Mississippi paddlefish): 121318104
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Entry
121318104 CDS
T07273
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15-like isoform X1
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121318104
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121318104
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121318104
04121 Ubiquitin system [BR:
pspa04121
]
121318104
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121318104
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121318104
Membrane trafficking [BR:
pspa04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
121318104
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121318104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
121318104
NCBI-ProteinID:
XP_041110338
LinkDB
All DBs
Position
7:complement(8328871..8360363)
Genome browser
AA seq
996 aa
AA seq
DB search
MAEGGPADLETQRAEIAALLKTQLRKGETWYLADSRWFKQWKKYVGFDNWDKYQMGDQNV
YPGPIDNSGLLKDGDSLSLKEHLIDELDYILVPTEGWNKLVSWYGLTENQEPVARKVVEQ
GMFVKHCKVEVYLTELKLCEDGNMDNVVTRRFSKADTIDTIEKEMRKCFTIPDEKETRLW
NKYMSSTFEPLNKPDSTVQDAGLYQGQVWYNAVSAEKVLVIEQKNDDGTWPRGSSTPKSP
GASHFSALPKISPSSLSNNYNGFNNRNVKNSNYCTPSYSSYNNYDYQEQGRHNEQPGLCG
LCNLGNTCFMNSAVQCLSNTPPLTEYFLNDKYQEELNMDNPLGMRGEIAKAYADLIKQIW
SGKFNYITPRAFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRIRKKPYIQLKDT
EGRPDKVVAEEAWEIHLKRNDSIIVDIFHGLFKSTVVCPVCCKVSVTFDPFCYLTIPLPM
KKERTLEVYLVRLDPLTKPMQYKLVVPKVGYLSDLCAALSTLSGVPADRMIVTDIYNHRF
HRIFATDENLSSIMERDDIYVFEMAINRSEDTDHVIIPVYQREKYRQSGYDHSGSPLFGQ
PFLITVPRVISEDKFYNMLLLRMCRYVQTTTENDEVEETPRCCKERSINGNGSNGVHEEG
SLSEMETDEQDDESSQDQELPSENDNSQSEGSVGGDNDLENGIGADQKSKGQQQLVGHKK
RLFTFQFNNLGNTDFNYMKEETGQIRFDDRQHRLDERSYLSLDWEPGLKKRYFDDSAAED
FEKHESMEYKPQKKVFVKLKDCIELFTTKEKLGIEDPWYCPNCKQHQQATKKLDLWSLPP
VLVVHVKRFSYSRYMRDKLDTLVDFPISDLDMSEFLINPNAGPCRYDLIAVSNHYGGMGG
GHYTAFAKSKDDDKWYYFDDSSVSIASEEQIVSKAAYVLFYQRQDTISGTGYFALDREAE
KGASAAAGAPAESDEDLNENDNDEHDVENENCMHTN
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggaggaccggctgatctggaaactcaacgagcggagatcgcggctctgtta
aaaacacagctacggaagggagagacctggtatttggctgatagccgctggttcaaacag
tggaaaaaatatgttggttttgacaactgggacaaataccagatgggagaccagaatgtg
tatccaggtcccattgacaattctggactcctcaaagatggcgactccctgtctctcaag
gaacacctcattgatgagttggactatatcttggtacctactgagggttggaataagctg
gtcagttggtatgggctgacagagaaccaagagccagtagcacgaaaggtggttgaacag
ggtatgtttgtaaagcactgcaaagtagaggtgtatctcacagaactgaagctgtgtgag
gatggaaacatggacaatgttgtaactagacgatttagcaaagcagacacaatagacacc
attgaaaaggagatgagaaaatgttttactattcctgatgaaaaggagactagattgtgg
aacaagtacatgagcagcacatttgaacctttgaacaaacctgacagcaccgtacaggat
gctggtctttaccaagggcaggtatggtacaacgcagtgtctgcagaaaaggttcttgta
atagagcaaaaaaatgacgatggaacgtggccaagaggctcttctacacccaagtcacca
ggtgcttcacatttttcagctttgccaaagatctcaccttcatctctatcaaacaattat
aacggcttcaacaacagaaatgtaaaaaactcaaactactgtaccccatcatactcgtct
tataacaactatgattatcaagagcaaggaagacacaatgagcagcccggcctgtgtggc
ttgtgtaacttggggaacacttgtttcatgaactcagctgtacagtgtttaagtaataca
ccgccactaacggagtacttcttaaatgataaataccaggaagagctgaacatggacaat
cctttagggatgcgaggtgaaatagcaaaagcctatgcagaccttattaagcaaatatgg
tcaggaaaattcaactatattactccaagggcatttaagacgcaagttggcagatttgca
ccccagttttctggctaccaacaacaggactctcaagaactcttggctttcctccttgat
ggattacatgaagatctaaacagaataagaaagaagccatacattcagcttaaagacaca
gaggggaggccagataaggttgttgcagaagaagcttgggagatccatctaaaacggaat
gactctatcattgtagatatttttcatggcctcttcaaatcaaccgtagtctgccctgtg
tgctgtaaggtttcagtgacatttgacccattctgttatctaactattccattaccaatg
aagaaagagcgcacattggaagtgtacctggtccgcttggatccacttacaaaaccaatg
cagtacaagctagttgttcctaaggttgggtatctatcagatctgtgtgcagccctctca
accttaagcggagtacctgcagacaggatgattgtaacagatatatacaaccatagattt
cacagaatatttgcaaccgatgaaaacttaagtagcatcatggaacgggacgacatttat
gtatttgaaatggctattaataggtcagaagacacggatcatgttatcatccctgtgtat
caacgggagaaatacaggcaatctgggtacgaccacagtggctcccctttgtttggtcaa
ccatttttgatcactgtgccaagagtcataagtgaagacaagttctataatatgttactg
ttgagaatgtgtcgatatgttcagacaacaactgaaaatgatgaggtagaagaaacccca
cgctgttgcaaagagcgcagtattaatggcaacggctctaacggagtacacgaggaaggg
tccctaagtgaaatggagacggacgaacaggatgacgaatctagtcaggatcaggagctt
ccttcagaaaatgataacagccaatcagaggggtctgtgggaggagacaatgacctggag
aatgggattggtgccgatcaaaagagcaaagggcaacagcagcttgtgggacacaaaaag
cgactctttacattccagtttaacaacttgggaaacacagacttcaattacatgaaagaa
gagaccgggcaaatacggtttgatgacagacaacacaggctagacgagagatcctatctg
tctttggactgggaaccaggactgaagaaaagatattttgatgacagtgcagctgaggat
tttgagaagcacgaaagcatggaatataaacctcaaaaaaaggtctttgtcaaattaaaa
gattgtattgagcttttcactacaaaggaaaaacttggaatagaggatccatggtactgt
ccgaactgtaaacaacaccagcaagccactaagaagctagatctgtggtcgctgccccca
gttcttgtggtacatgtgaaacgcttttcctacagcagatatatgagggacaagttggat
accttggtggattttcctataagtgatttggacatgtcagagttcctgatcaaccccaat
gccggcccctgtcgatatgatctgattgctgtatctaaccactatggaggaatgggtgga
ggacactatactgcctttgctaagagcaaagatgatgataagtggtactacttcgatgac
agcagcgtttcaattgcatctgaggagcaaatagtgtccaaggctgcgtatgtactcttc
taccagagacaagacacaatcagtggaactggttattttgcacttgaccgggaagctgag
aaaggggcttcagcagctgcaggggctccagcagagagcgatgaagacttgaatgaaaat
gacaatgatgagcatgatgtagaaaatgaaaactgtatgcacactaactaa
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