Polyodon spathula (Mississippi paddlefish): 121318113
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Entry
121318113 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
pspa04144
Endocytosis
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121318113
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121318113
09144 Cellular community - eukaryotes
04530 Tight junction
121318113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121318113
04121 Ubiquitin system [BR:
pspa04121
]
121318113
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121318113
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121318113
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
HECT type E3
121318113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WW
HECT
Motif
Other DBs
NCBI-GeneID:
121318113
NCBI-ProteinID:
XP_041110357
LinkDB
All DBs
Position
1:36521112..36601035
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AA seq
1033 aa
AA seq
DB search
MAHRLRLYFGSGRSNTAPEMEGLGGAPEEGYAMTFHTLPRRSGPPPFPDPGPPLLDEASL
KRSSSMFIPQLLNQVEPRPTRSSSMQISLQRNAGSGEDGETLDSPQETFLGPAPAYEEPT
RKYSWPSGNAQNKGALPRNLPMGTVQLASEPESQNHRVFCVVPSDRQTGRTTPEVTNGGQ
PGINIGGVRIHRNSLGSSDIHQFRIQPYGPENQKASQRWSLQPDSSGDTGKRCFIVQLQQ
NQPGIPEVPHEESGNLGFTGTKGERVVRYPRLRLNRSTSYPIQPRSESPRHVPGNATVNG
QEMDSNNPISESLSTNSQEGASAQTQGCTFKIRQEQNKRQPQFRISFSRGSEEQSKASPQ
DINGGNIHARISPQTRDDFLGQVDVPLNHLPTEDPTMERPYTFKDFLLRPRSHKSRVKGY
LRLKMAYLPKSGSQEEENGEQREEAEGWEESDSSDVGSQRQQQLPPLPPGWEEKIDNLGR
TYYVNHNTRTTQWKRPTVVDLVSEMENDNNIRQINQEAQRVFRSRRHISEDLEHEQIETR
DMDDSWDAISEETSFSADQSDPLPASPPSVPQTSPQEFSEELSRRLQLSPDANGVHLVPA
VQSQLASRMRSSSMTDGISEQAQQPPPQNTQDGRARAQTVSGAEESMQSPSMAYVHTTPG
LPPGWEERKDNKGRTYYVNHNNRTTSWTRPIVQHTEDGATASTSNVSSHLSEPQLRRPRS
LSSPTVTLSTPLEGTANNVTVRRAVKDTFSNPQSPQPSPYSSPKSNRKTGQSFLPPGWEM
RIAPNGKPFFIDHNTRATTWEDPRLKYPVHLRSKASLDPSDLGPLPKLLEEPGWEERVHA
DGRTFYIDHNTKITQWEDPRLMNPAITGPAVPYSREFKQKYDYFRKKLKKPADIPNRFEM
KLRRNNIFEESYRRIMSLKKPDNLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYY
GLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVFHGKLLDGRPCQVKCNTNT
HFTFQVFSKLHEG
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggcccaccgtctgcggctctacttcggctctgggcgcagcaacacagcccccgagatg
gaaggattgggcggagcaccggaagagggctatgccatgacattccacactctgccccgg
aggagtggccctcccccttttcctgatccagggcctcccctgctggatgaagcatccctg
aaacgcagctcctcaatgttcatcccccagctcctgaaccaggttgagcctcggcccaca
aggagttcctccatgcagatctccctgcagcgcaatgctggcagtggggaagacggagag
accttggattctcctcaagagacctttctgggcccagcaccggcctacgaggagcctaca
agaaaatattcctggccttcaggcaatgctcagaacaagggtgctttgcctaggaatcta
cctatgggcactgtacaactagctagcgagcctgaatcacagaaccacagggttttttgt
gtggtgccttcagaccgccaaactggccgcacaactccagaggtgacaaatggggggcag
cctggaataaacatcggaggggttcgcatccacagaaactccttggggagttcagacatc
catcagtttcggattcaaccttatggcccagagaatcagaaggcctcacaacgctggtct
ctgcaaccggactccagtggtgacactggaaagcgttgttttattgtgcagctccagcag
aatcaacctgggattcctgaggtgccgcatgaggagtctgggaacctgggcttcactggc
acaaagggagagagggtggtaagataccctagactaaggctgaataggagcacttcatat
ccaatccagccccggagcgagtcaccacgccacgttcctggaaatgccactgtaaacggg
caagagatggacagcaacaacccgatttcagaaagtctgagtactaactcacaggaagga
gcctctgcacaaacacaaggctgtaccttcaaaattagacaggagcaaaacaagaggcag
ccccagttcaggatttctttttcccggggctcggaagagcaaagtaaagcttccccacag
gatataaatggtggaaatatacatgccagaatcagccctcagacgagagatgacttcctg
ggacaggttgatgtgcctcttaaccatttgccaacagaggatcccacaatggagcgtccc
tatacttttaaagacttcttgcttagaccacgaagccacaagtccagggtgaagggatac
ctgcgtttgaaaatggcctacttaccaaaaagtgggagtcaggaagaagaaaatggggaa
cagagagaggaagctgagggctgggaagagtctgactccagtgatgtgggttcccagcgc
cagcagcagttacccccactgccccctgggtgggaagagaagattgataacctgggccgg
acatattatgtcaaccataacaccaggactacacagtggaaaaggccaaccgttgtagat
ttggtttctgagatggagaatgacaacaatatcagacagatcaaccaggaggctcaacgg
gtgtttcgctccagaagacacatcagtgaagacctggagcatgagcaaattgaaaccaga
gatatggatgattcctgggacgcaatctctgaggagaccagtttttcagcagaccagtct
gatcctcttcctgcctccccgcccagcgtcccccagacgagcccccaggagttctctgag
gagctcagccgcagacttcagctctctcccgatgctaatggagtgcaccttgtccctgcc
gtgcagagccagctggcgtccagaatgcgctcgtcaagcatgacggacgggattagcgaa
caggcccagcagccaccaccgcagaacacccaggatgggagagcccgtgcccaaactgtc
agtggcgctgaagagtcaatgcaatcgccctccatggcctatgtccacaccacgcctggt
ttaccaccaggatgggaggagagaaaagacaacaagggacgcacctattatgtcaaccat
aacaaccgtacaacatcctggacccgtcctattgtgcagcacacagaagacggggccaca
gcctcaacctcaaacgtcagcagccatctaagcgagcctcagctaagacggcctcgcagt
ctcagctctcccacagtaaccctgtcgaccccgcttgagggtactgctaacaatgtcaca
gtccgccgagctgtgaaagacacattctccaaccctcagtccccacagccctcaccttac
agctcccccaaaagcaatcgcaagacaggacagagcttcctgccaccaggctgggagatg
aggatagctcccaacggcaaacccttcttcattgaccacaacactagagctaccacttgg
gaagatccacgattaaaatatccagtacatttgaggtcaaaagcatctttggacccaagt
gatcttggcccccttcctaaactgcttgaagagcctggctgggaggagagagtgcatgca
gatggaaggacgttctacattgaccacaatacaaaaatcacacagtgggaggacccaagg
ctgatgaacccagctattactggtcctgctgtgccatattccagagaatttaaacagaaa
tatgactactttaggaagaagttaaagaaacctgcagatatcccaaacagatttgaaatg
aagctgcgcaggaacaacatattcgaggagtcctacagaagaatcatgtccttgaagaag
ccagacaatctgaaagccagactgtggattgagtttgagtcagagaagggtctggactat
ggcggtgtggccagggagtggttcttcctgctgtcaaaggaaatgttcaatccttattac
gggctcttcgagtactcggcaacagataactatacccttcagatcaacccaaactccggt
ctgtgtaacgaagatcatctttcctactttaagtttatcgggcgagtggcaggaatggca
gtatttcatgggaagctgctagacggtaggccttgtcaagtaaagtgtaacaccaacacg
cattttacatttcaggtattttcaaaactgcatgagggttaa
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