Polyodon spathula (Mississippi paddlefish): 121318145
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Entry
121318145 CDS
T07273
Symbol
lman1
Name
(RefSeq) protein ERGIC-53
KO
K10080
lectin, mannose-binding 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121318145 (lman1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121318145 (lman1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pspa04091
]
121318145 (lman1)
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
121318145 (lman1)
Lectins [BR:
pspa04091
]
L-type lectins
121318145 (lman1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Lectin_legB
KxDL
C4
Motif
Other DBs
NCBI-GeneID:
121318145
NCBI-ProteinID:
XP_041110448
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All DBs
Position
1:complement(36861329..36882897)
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AA seq
505 aa
AA seq
DB search
MAVSMDKWLTAAAGLLICSVIFNRTNAGVAPGSNDAPHRRFEYKYSFKGPHLSQSDGTIP
FWVHNGNAIPSADQVRITPSLRSQKGSVWTKNKANFENWETEITFRVTGRGRIGADGLAI
WFTSDQGLEGPVFGATDSWNGLGIFFDSFDNDAKKNNPAVLIVGNNGKLVYDHQNDGSTQ
ALGSCLRDFRNKPYPVRAKITYYKKSLTVWINNGFTPDKEDYEFCAKVDNMIIPTEGFFG
ISAATGGLADDHDVLSFLTFRLTEPGQQEPVPDPEIPQEEKEKYQEEFEHFQQDFDKKKH
EFQKEHPDIHEQPSEDNYESVSDREVRQIFEGQNRIHLEIKQLNRQLGMILDEQRRYVTI
VTDEITKRGAVAHGQPGQTPTEELDSIVKAQQEVLRNVNDMRNTLTESLRLVGNVHNQGN
AAGTYETVQHFNDIKEHLHMVKKDIDHLIQRNRGPNEKVTCPELPPFPSCLSTTHFFMFV
AVQTVLFIGYIMYRSQQEAAAKKFF
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccatggacaagtggttgactgctgctgccggtttactaatatgttctgta
atatttaatcgcactaatgcaggagtggcgccaggatctaacgatgctcctcaccgccgg
tttgaatacaaatacagcttcaaaggacctcatttatcacagagcgatggcactatcccc
ttttgggtgcacaatgggaatgctattccaagtgctgatcaagtccgaatcacaccatca
ttgagaagtcaaaaaggctcagtgtggacaaaaaacaaagcaaactttgaaaactgggaa
actgaaattacatttcgtgttaccggaagaggaagaattggagcagatggccttgcaatc
tggttcacgtcagaccaaggacttgagggtccagtctttggcgcgacagattcatggaat
ggccttggaattttctttgactcatttgacaatgatgcaaagaaaaataaccctgctgtt
cttatcgttggaaacaatggaaaacttgtttatgaccatcaaaatgatggttcaacccaa
gcactggggtcctgcctaagggacttcagaaacaagccctatccagtcagagccaaaatc
acatactacaaaaagtcattaacggtttggataaacaatggatttactccagataaggaa
gattatgaattttgtgccaaagtggacaatatgattattccaactgaaggtttttttgga
atttctgcagctacaggaggccttgcagatgatcacgacgttttgtctttcttgacattc
agactgactgaacctggacaacaagagcctgttcccgaccctgagattccacaagaggag
aaggaaaagtaccaagaggagtttgaacatttccagcaagattttgacaagaagaaacac
gaattccaaaaagagcaccctgacatccatgaacagccatctgaagataattatgaatct
gttagtgaccgggaggtcagacagatctttgaaggccagaacagaatccacctggagatc
aaacagctgaacagacagttgggtatgatcctggatgagcaaaggcgctatgtgactata
gtaacagatgaaatcacaaagagaggagctgtggcacatggccagccaggacagactccc
accgaagaacttgactctattgtaaaagcacagcaagaggtgcttagaaatgtcaatgat
atgaggaatacattaacagagtctctcagactagtgggtaatgttcacaatcaaggcaat
gctgcagggacatatgaaactgtccagcacttcaatgacattaaggaacaccttcatatg
gttaaaaaagatattgaccatttgatacagagaaacagggggccaaatgaaaaggtgacg
tgtccagagcttccacctttcccatcatgtttatctacaacccatttcttcatgtttgta
gcagttcaaacggtgttgtttatcggttatataatgtataggagtcagcaagaagctgct
gccaagaagttcttttga
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