KEGG   Polyodon spathula (Mississippi paddlefish): 121318178
Entry
121318178         CDS       T07273                                 
Name
(RefSeq) transportin-3 isoform X1
  KO
K15436  transportin-3
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013  Nucleocytoplasmic transport
pspa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121318178
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121318178
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pspa03016]
    121318178
Transfer RNA biogenesis [BR:pspa03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    121318178
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N TOR1L1_N Importin_rep_3
Other DBs
NCBI-GeneID: 121318178
NCBI-ProteinID: XP_041110517
LinkDB
Position
7:complement(12493411..12515855)
AA seq 936 aa
MEGGKPSLELVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEIADQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPAETHISLRDSLLSHIQNLKDLSPVIVTQLALAIADLALQMA
SWKGCVHTLIEKYSNDVSSLLFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTV
VTLLMSCVEKTGNNEKMLIKAFRCLGSWFNLGVLDSNFMANNQLLIVLFQVLQRDDTSTN
LHEAASDCVCSSLYAIENVDNNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETIVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTSDPV
LHGLFRPFIQRLLHALARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDLIFLVGSMECF
TQLYSTLKDGNPPWEVTEAVLFIMAAIAKSIDPENNPTLTEVLEAVVHLNQNVHIAVRYT
SIELVGEMSEVVDRNPQFLDPVLNYLMKGLREKPLASVAAKAIHNICSVCRDHMAQHFQG
LLDIARSLDSFALSADAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVIALKKLLSQEA
SNGKSSDPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHQADNRIVE
RCCRCLRFAVRCVGKGSAALLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCQQG
LLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFIQRSPVTLLRSQIIVHIIQCA
IAATSLDHRDANCSVMKFMRDLIHTGIANDHEDDFEMRKQLIQQAMSQNGQQLVNQLIHT
CCFCLPPYTLPDVAEVIWEIMLFDRPTFCRWLENALKGLPKETSGGAVTVTHKQLTDFHK
QVTRTVPLTAQCPTLSSAEDCKHVCWALRDFTRLFR
NT seq 2811 nt   +upstreamnt  +downstreamnt
atggagggtggcaaaccgtcccttgagttggtttatcaggccgtgcaggctctttatcac
gacccggaccccgccggcaaagagcgagcctctgtgtggctcggagaactgcagagatcg
atgtatgcatgggagatagcagatcagctgctgcaactaaaacaagacgtggaatcctgt
tatttcgcagcacagacaatgaagatgaaaattcagacctcattttatgaacttccagca
gaaacgcacatctccctgagggattcactgctgtcacacatacagaatctaaaggacctc
tctcctgtcattgtcactcagctcgctctagcaatagctgaccttgccctgcagatggca
tcttggaaaggatgtgttcacacacttattgaaaagtacagcaatgatgtgtcctcactt
ttattcctgattgaaatcctcactgttctgcctgaggaggtgcacagtcggtccctgcga
attggtgctaaccgccgcactgagatcattgaggacctggcctactactcaagcactgtt
gtaactctactgatgtcctgtgtggagaaaactgggaacaatgaaaaaatgctgatcaag
gcattccgctgccttgggagctggttcaaccttggtgttctggacagcaactttatggca
aataaccagctgcttattgtacttttccaggtgctgcaaagggacgatacctccaccaac
ctgcatgaggcggcctcagactgtgtgtgttcgtctctgtacgctattgagaacgtagac
aacaacctgcccctagccatgcaactattccaaggggtcctaacgctggagacagcatac
cacatggctgtggcacgggaagacttggacaaagttttgaattattgtcgcattttcacg
gaattgtgtgagacctttctggagacgatagtgaggagtcccggtcagggaatgggagat
ctacgaacactagagttgctgcttatctgtgcaggacacccacaatatgaagtagtagag
atctcctttaacttctggtataggctaggggagcacctgtataaaaccagtgacccagtg
cttcatggactttttcgaccattcatccagaggttgttgcatgcattggcaaggcactgt
caactagaccctgatcatgaaggaatacctgaagacacagatgattttggagagttccga
atgagggtctcagatcttgtgaaggatttgatttttttggttggatccatggaatgtttc
acgcagctctattccactttaaaagatggtaatccgccatgggaggtgactgaggcagtg
ctttttataatggctgctatagcaaagagtattgatcctgagaataatccgactcttaca
gaagtgcttgaagcagttgttcacctcaatcagaatgtacacatcgctgtcagatacacc
agtattgaactggttggagagatgagtgaagttgttgaccggaatcctcaatttttggat
ccagtgcttaattatctaatgaaggggctgagagagaagcccctggcgtccgtagctgct
aaagcaattcacaacatctgctcagtgtgccgtgatcacatggctcagcacttccagggg
ctcttggacatcgcccggtcccttgactcttttgcactgtcggcagatgcagctgttggg
ctcctgaaaggaacagcattagttctagccaggctccctctagagaagatagcagaatgt
ttaagtgatctgtgcgcagttcaagttatagcccttaaaaagctcctgtcacaggaggca
agtaatggtaaatcttcagatcccactgtgtggctagatagattagcagtaatattcagg
catacaaaccctattgtagaaaacggacaaacccatccatgtcaaaaagttattcaagaa
atctggcctgtcttgtcggaaaccttgaacaagcaccaagcagataaccgaattgtggaa
cggtgctgtcgctgcctgcgctttgcagtgcgctgtgttgggaagggctcagctgcactc
ctgcagcctcttgttactcagatggtgagtgtatatcaggtctatccacactcatgtttc
ctgtacctggggagtatcctggtagatgaatatggaatggaggagggctgtcaacaagga
ctgcttgacatgctacaggctctatgtatgcccactttccagttgctggaacagcctaat
ggtcttaggaatcacccagacactgtggatgatcttttccgattggcaacgaggtttatc
cagcgaagtcctgtcacactgctgcgtagccaaattatagttcatattatccagtgtgcc
attgctgccaccagccttgatcatagggatgccaactgcagtgttatgaagtttatgaga
gatctgatccacacaggcatcgccaatgaccatgaagatgactttgagatgcgcaagcag
ttgattcagcaggctatgtcccagaatgggcagcagttggtgaaccagctgattcacaca
tgctgtttctgcctgcccccctacactctgcctgatgtggctgaggtaatctgggagatc
atgctctttgaccggccgacattttgccgctggctagaaaatgcattgaagggactccct
aaagagacatcgggtggagcagtgacagtgacacacaagcaactcacagacttccacaaa
caagtaaccaggacagtaccccttacagcacagtgccccaccctcagcagtgctgaagac
tgcaaacatgtgtgctgggctttaagagacttcaccagactgtttcgatag

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