Polyodon spathula (Mississippi paddlefish): 121318191
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Entry
121318191 CDS
T07273
Name
(RefSeq) hepatocyte growth factor-like
KO
K05460
hepatocyte growth factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
pspa04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121318191
04020 Calcium signaling pathway
121318191
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121318191
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121318191
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121318191
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Growth factors (RTK binding)
121318191
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121318191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kringle
Trypsin
PAN_1
DUF1986
Motif
Other DBs
NCBI-GeneID:
121318191
NCBI-ProteinID:
XP_041110538
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All DBs
Position
7:complement(13145295..13165083)
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AA seq
708 aa
AA seq
DB search
MWALQILLCLALLVYTESRGAKRNALQDYEMSEGVYLNRTNRLLSKRKALSEVKCAKWCS
RNKDVSFVCKAFYYNKKENKCHLLPFTSKTPGVRKEMDFRYDLYEKKDYVRECIIGNGSN
YKGMKTVTKTGLKCQAWSSMVPHEHSFLPSKYLEGNYCRNPDNEASGPWCFTTDPDIRHQ
SCDIPQCSEDECLTCNGENYRGSMDHTETGKECQRWDLNRPHKHVFHPKRYPDKGLNDNY
CRNPDKKLRPWCFTLHPNTTWEYCSIKVCAESVKSDPDTTTQCFQDQGEKYRGTVNTAPN
GIRCQRWDSQYPHIHSYTPQNYKCQDLKENYCRNPDGAELPWCFTTDPKVRVAFCTHIPR
CGTDTPDPEVHCYNGTGEDYRGHMSKTRSGFPCAMWDESLKSKSLTLSEQSTAGLQKNYC
RNPDKDKHGPWCYTNNPSIPWDYCDLKRCETSGPNITGTLPSQESCFVHKRTRIVGGAPV
KIKEASWMVSIQKGNDHWCGGSLVREEWVLAAKQCFSSCIPDLTEYSVWLGFLHLNEAGR
ELSSKQVLRISHLVCGPLGSDLVLLKLSGPAWQTEHVRIIQLPVAGCVIKENTYCTVYGW
GETKGTGYDGMLKAVKLPIVGNQICNEYHKGRITVAESELCAGGRKDEGVCEKDYGGPLV
CEEHDSKVVQGVSVHGRGCGRPNRPGIFVSIPYYTDWIHKVFKILSSP
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcactccagattctcctctgcttggcgctgttggtttacacagaaagtaggggt
gcaaagaggaatgctcttcaagattatgagatgagtgaaggagtctacttgaacagaaca
aataggctcctgtccaaaaggaaagcccttagtgaagtaaagtgtgcgaagtggtgcagc
aggaacaaggacgtgtcttttgtatgcaaggctttctattacaacaagaaagaaaataaa
tgccacttgctaccatttaccagcaaaaccccaggtgttagaaaagaaatggactttcga
tatgatctttatgaaaagaaagattatgtaagggagtgcatcattgggaatggatcaaac
tataaagggatgaagactgttacaaaaactggcctgaagtgccaggcctggagttctatg
gtgccacatgagcacagctttttgccttcaaaatacctggagggtaattactgcagaaat
ccagacaacgaggcttcaggaccctggtgtttcactacagatcctgacatccgccaccag
tcatgtgacatccctcagtgttcagaagatgagtgtctgacttgcaatggggagaattac
agagggtcaatggaccacacagaaacagggaaggagtgccagcgatgggacctgaaccgg
ccccacaaacacgtgttccaccccaaacgatacccagataaaggactgaatgataattac
tgtcgtaatccggacaaaaaactgcggccgtggtgcttcactctgcaccccaacactact
tgggaatactgcagtattaaagtctgtgctgaaagtgtaaaatctgatccagacacgact
acacagtgcttccaagatcaaggggaaaaatacagaggcacagttaacacagcacccaat
ggaattaggtgccagaggtgggactcacaatacccacacatccattcctatacaccccag
aattacaaatgccaagatctaaaggagaattactgtagaaatcctgatggtgctgaacta
ccatggtgcttcacaacagatcccaaagtgcgagtcgccttctgcacccacatcccacgg
tgcggtacagacactcctgatcccgaagtacactgttacaatggcactggtgaggactac
agaggacacatgtcaaaaacaagatctggttttccatgtgcaatgtgggacgagagcctc
aaaagcaaaagtttgactttaagtgaacagtcaacagctggtctgcagaagaactactgc
cggaaccctgataaagataaacatggcccctggtgctacacaaacaacccctcaattcct
tgggactactgtgatttaaagcgctgtgaaacgtctgggcccaacattacaggaacactt
ccttcacaagagtcctgttttgttcataagagaaccagaattgttggaggtgctccagtg
aaaattaaggaagccagctggatggttagcatacaaaaaggcaacgaccattggtgtggt
ggatcattagtaagagaagaatgggttcttgcggctaaacagtgcttctcctcctgcata
cccgatttaacagaatacagtgtctggctgggttttcttcatctcaatgaagcaggaaga
gagctttcaagtaaacaggttctaaggatatcccatcttgtctgtggaccactgggctct
gatctagtattgctgaaattatcagggcctgcttggcaaacggaacatgttcgcataatt
caactccctgttgcaggatgtgtcattaaagaaaatacctactgtacagtttatggatgg
ggagaaacaaaaggaactggatatgatggcatgttgaaagcagtgaagttaccaattgtt
gggaatcaaatatgtaatgaatatcataaaggaaggattacagtggcagaatcagagctc
tgtgctgggggaaggaaggatgaaggagtatgtgagaaagactacgggggcccactggtg
tgtgaggaacatgattctaaagtagtacaaggtgttagtgttcatggccgaggctgtggt
cgtcctaaccgccctgggatctttgtcagtataccatattacacagactggattcacaag
gtcttcaaaatactatcaagcccttaa
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