Polyodon spathula (Mississippi paddlefish): 121318199
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Entry
121318199 CDS
T07273
Name
(RefSeq) cyclin-D-binding Myb-like transcription factor 1 isoform X1
KO
K21625
cyclin-D-binding Myb-like transcription factor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121318199
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
121318199
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
DMTF1_N
Myb_DNA-bind_6
Myb_DNA-bind_4
Motif
Other DBs
NCBI-GeneID:
121318199
NCBI-ProteinID:
XP_041110554
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Position
7:14015828..14033449
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AA seq
744 aa
AA seq
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MNTIEDESGTVTLETVNSVTLTQDTDGNIIFHCPQNADTEELGSDECLDLARKRLRLSTE
DDTSRISVVTLPISENDDSFEVTMTATTEMTESEIDEGAVAQIQIIQNDGSLSPNTTDDV
SPVSQAWFTTKEDKDSLVNKGHKWKQGMWSKEEIDILMSNIDCYLKNRGIQDPTEIIFEM
SKDERKDFYRSIAWGLNRPLFAVYRRVLRMYDNRNHVGKYTPEEIDKLKELREKHGNDWA
TIGSALGRSASSVKDRCRLMKDTCNTGKWTEEEERRLAEVVHELTGTEPGHTVTQGVSWA
SVAELVGTRSEKQCRSKWLNYLNWKQSGGTEWTKEDDNNLIKRIAELGVDDENDINWDTM
AGGWSSVRSPQWLRSKWWTIKRQVTNHKDLAFSVLLKGLQDLMENQLPDNKFGVGPRTGC
SSPSTVQQVQIRVAGLEETSSASQNPMTALQIPVQITHVSSSDSSTAATDTDTITLNSGT
LQTFEILPSFHLQPTGTPGTYFIQTGSNQGLPLTLSTSPTVTLTAAPSPSSSDQIIVHAL
SPDNLLNSSDNVTVQMSHPSVIIRAVTTDDIGSPGTQTDLTVDHPDLTDPQQTLEVDSFS
SEIHQDKLEEDQDSPPTDSGNGSELRHANQTKFLYSTTAEPETGLGQEEEVQTELTAYTD
EALGSPSMEEQVGESTIAEGTVLTVPSSDGFMQTTDLDNDSVLPLTTLTGPILEHQGEVS
DINSSLDSPDSVDSKDIEGFVDCR
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaattgaggatgagtctggcacagtgactttggaaaccgtaaactctgttaca
ttaactcaagacacagacgggaacattatctttcactgccctcaaaatgcagatactgaa
gaactggggtcggatgaatgtttagacctggctcgcaagagactgcgattatcgactgaa
gatgacacatcaaggatttctgttgtcacactcccaatttcagaaaatgatgacagcttt
gaggtgaccatgactgccaccacggagatgacagaaagcgaaatcgatgaaggtgctgtt
gcacagattcagattatccagaatgatgggtccttatctccaaacaccactgatgatgtg
tccccagttagccaagcttggtttacaacaaaggaagataaagattccttagtgaacaaa
ggccacaagtggaaacagggaatgtggtccaaagaagaaatagacatccttatgagcaat
attgattgttacttaaagaatcgtgggatccaggacccgacagagattatctttgaaatg
tctaaggatgagagaaaggatttctacaggagtattgcatggggcctcaaccgccccctg
tttgctgtttacagaagggtcctccgcatgtatgacaacaggaaccatgttggaaagtac
acccctgaagaaattgacaagctaaaagaacttcgagagaagcatggcaatgattgggct
accattggttcagcattgggaagaagtgcatcctctgtgaaggacaggtgcagactaatg
aaagatacctgcaatacagggaaatggacagaagaagaggagcggaggctagctgaggtg
gtgcatgaactcacgggtacagagcctggtcacacagtcacccagggggtatcctgggcc
tctgttgctgagctggtgggtacccgctctgagaagcagtgccgatccaagtggctcaac
tacctcaactggaaacagagtggtggcacagagtggacaaaggaagatgacaataatctg
atcaaaagaattgcagaactgggggtggatgatgagaatgatatcaattgggacaccatg
gctgggggctggagcagcgtccgctctccacagtggttaagaagtaaatggtggaccatc
aaaagacaagtgaccaaccacaaagatcttgccttctccgtgctcctgaaaggtctccag
gacctgatggaaaaccagttgccagataataagtttggggtgggacccaggactggctgc
agctccccctctaccgttcaacaagttcagatcagagttgctgggctggaagagaccagc
agtgcctctcaaaacccaatgacagccctgcagatacctgtgcagatcacacatgtctcc
tctagtgattcctctactgctgccactgacacagatacaataactctaaattctgggaca
cttcagacatttgaaatcctaccttcattccacctgcagcctacgggaaccccaggcacc
tatttcatccaaacggggtcaaaccaaggtcttcctttaacactgtcgactagtccaaca
gttacactgacagcagcaccatcaccatcgtcttcagatcagatcattgtacatgcactg
tctccagataatttgcttaactcaagcgacaatgttactgtccagatgtcccaccccagt
gtcattatccgtgctgtaacgacagacgatattggttcccctggaacccagacagatttg
actgtggaccaccctgacttgactgacccccaacaaacactggaagtggattccttcagc
agtgaaatccaccaggacaagttagaggaagatcaagacagcccccctacagattctgga
aatgggtcagagctcagacacgccaatcaaacaaaatttctatatagcactacagcggaa
ccagagactggacttggacaggaagaagaagtgcaaacagagctgactgcatacacggat
gaggctcttggatctccatctatggaagagcaagttggtgagtcaacaatagcagaagga
actgttcttactgttccatcctccgatggatttatgcagacaactgatctcgacaatgac
tctgtcttacccttgacaacactaacaggtcctatactagaacatcagggagaagtctcg
gacattaattcatcacttgacagccctgattcagtggactcaaaggatatcgaaggattt
gttgactgtcgctga
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