Polyodon spathula (Mississippi paddlefish): 121318232
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Entry
121318232 CDS
T07273
Name
(RefSeq) coatomer subunit gamma-2-like
KO
K17267
coatomer subunit gamma
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121318232
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121318232
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121318232
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121318232
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Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
COP-gamma_platf
Coatomer_g_Cpla
HEAT_2
Cnd1
HEAT_EZ
PDS5
Stomoxyn
UNC45-central
MOR2-PAG1_C
DUF8079
Motif
Other DBs
NCBI-GeneID:
121318232
NCBI-ProteinID:
XP_041110621
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Position
7:complement(15193527..15204069)
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AA seq
873 aa
AA seq
DB search
MIKKFDKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKIIYLLNQGEH
FGTTEATEAFFAMTRLFQSNDQTLRRMCYLTIKEMANISEDVIIVTSSLTKDMTGKEDVY
RGPAIRALCRITDTTMLQAIERYMKQAIVDKVPSVSSSALVSSLHMVKMSYDVVKRWVNE
AQEAASSDNVMVQYHALGLLYHLRKNDRLAVSKMLNKFTKSGLKSPFAYCMLIRIASRLL
EETDGGHDNPLFDFIESCLRNKHEMVVYEAASAIVHLPNCTARELAPAVSVLQLFCSSPK
AALRYAAVRTLNKVAMKHPSAVTACNLDLENLITDSNRSIATLAITTLLKTGSESSVDRL
MKQISSFVSEISDEFKVVVVQAISALCQKYPRKHSVMMNFLSNMLRDDGGFEYKRAIVDC
IISIIEENPESKETGLAHLCEFIEDCEHTVLATKILHMLGKEGPRTPTPSKYIRFIFNRV
VLESEAVRAAAVSALAKFGAQNDELLPSVLVLLQRCMMDSDDEVRDRATFYMNVLLQKQK
ALNAAYIFNGLSVSVAGLEKSLHQYTLEPTEKPFDMKTVPLASAPINEQKTEIATVVTSK
IPEKVGPSRQDIYQEQLAAIPEFKALGPLFKSSDPVQLTEAETEYVVRCIKHTFTNHMVF
QFDCTNTLNDQLLQKVMVQMEPSEAYEVVHYVPAQDLPYSQPGSCYTLVRLPDDDPTAVS
CTFSCTMKYLVRDCDPNTGEPDEDGYDDEYVLEDLEVTVADHIQRVLKPNFGAAWEEVGD
EFEKEETFALASVKTLEEAVGNIISFLGMQPCERSDKVPENKNSHVLFLAGVFRGGHDVL
VRSRLALADGVTMQVTVRSTEETAVDVILASVG
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgattaagaaattcgacaaaaaggacgaggagtctggaagtggctctaacccttttcaa
catctggagaaaagtgctgttcttcaagaggcgcgtatttttaatgaaactccaataaac
cccagaagatgtcttcatatcctcacaaagattatttatctcctgaaccagggtgagcat
tttggaacaacggaagctacagaagcgttttttgccatgaccaggctgtttcagtcaaat
gatcaaacactgagaagaatgtgctacctgactataaaagagatggcaaacatctctgag
gatgtgatcattgtcacaagcagtttgaccaaggatatgacgggaaaggaagatgtctac
aggggccctgcgatcagagctctttgccgtattactgataccactatgttgcaagcaatt
gagagatacatgaaacaggccattgtggataaagtgcccagtgtgtcgagctctgcgttg
gtttcatcattgcatatggtgaagatgagttatgacgttgttaaacgttgggtgaatgaa
gctcaggaggctgcctctagtgacaacgtgatggtgcagtaccatgcattaggtcttcta
taccacctgagaaaaaatgaccgcttggctgtgtcgaaaatgttgaacaaatttaccaag
tctggcctgaagtccccgtttgcatactgtatgctgatacgtattgccagcagactgctg
gaggagacagatggaggacatgacaatcctttgtttgacttcattgagagttgcctgcga
aataagcatgagatggtggtatatgaagcagcttcagccattgtacatcttcccaactgt
acagcaagggagcttgcaccagctgtctcagtgctccagctgttctgtagctctccaaaa
gcagctttgagatatgcagcagttaggactttaaataaggtggcgatgaaacatccatca
gcagtaacagcctgtaacctggacttggagaatctaattacagattcaaaccgcagcatt
gctacgctggcaatcaccaccctgctgaaaacaggcagcgagagcagtgtggacaggctt
atgaaacagatctcatcctttgtgtctgaaatatctgatgagtttaaggtggttgtagtg
caggcaatcagtgcactctgtcagaaatacccccgcaagcacagtgtgatgatgaacttc
ctctccaacatgctcagggatgatggtggatttgagtacaagcgtgctattgtggattgc
atcataagtatcattgaggagaacccagagagtaaggaaactggccttgctcacctgtgc
gagttcatagaagactgtgaacacactgttctggccaccaagatcttgcatatgctgggc
aaggaaggacccaggacccccacgccttccaaatacatccgcttcatttttaacagggtt
gttcttgagagcgaagctgtacgagcagctgctgtgagtgctttggctaagtttggagct
cagaatgatgaacttcttcccagtgtgcttgttcttttacagaggtgtatgatggacagt
gatgatgaagtacgtgacagagctacattctatatgaatgtgctcttgcagaaacaaaaa
gcactgaatgctgcttacattttcaatggtttgtctgtatctgttgctggtttggaaaaa
tctctacatcaatacactcttgaacccacagaaaagccatttgatatgaaaactgttcct
ctggcttctgcaccaattaatgaacagaaaacagaaattgccacagtggttaccagtaaa
atcccagagaaagtgggtccatctcgtcaagacatatatcaagaacaactggcagccata
cctgaatttaaggccctgggtcctctgttcaaatcttctgatccagttcagctcacagag
gcagagacggagtatgtggttcgctgcataaaacacactttcacaaatcacatggtattt
cagtttgactgtacaaataccttgaatgatcagcttctacagaaagttatggtgcagatg
gaaccttcggaagcttatgaagtggtccattatgtgccggcacaagatttaccatatagc
cagcctgggtcatgttacactcttgtcagactgcctgatgatgatcccactgcagtttct
tgtacgttcagctgcacaatgaagtatttagtacgggactgtgacccaaacacaggggag
ccagatgaagacggttacgatgatgaatatgtgttggaagacctagaggtaactgtggct
gaccacatacagagagtcttaaaacccaactttggggctgcatgggaagaagtgggagat
gaatttgaaaaagaagaaacatttgctcttgcttctgtaaaaactcttgaagaggctgtt
ggtaacattattagcttcctgggaatgcagccatgtgaaagatcagacaaggtcccagag
aacaaaaactcacatgtgctcttcctcgcaggtgttttcagaggtggccacgacgtgttg
gtgcgctccaggcttgctctagctgatggagtcacaatgcaggtgacagtgcggagcaca
gaagagaccgcagtagatgttatccttgcttccgttggctaa
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