Polyodon spathula (Mississippi paddlefish): 121318252
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Entry
121318252 CDS
T07273
Symbol
rbm17
Name
(RefSeq) splicing factor 45 isoform X1
KO
K12840
splicing factor 45
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121318252 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121318252 (rbm17)
Spliceosome [BR:
pspa03041
]
Complex A
U2 snRNP components
U2 related factors
121318252 (rbm17)
Complex B
121318252 (rbm17)
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Sema4F_C
Motif
Other DBs
NCBI-GeneID:
121318252
NCBI-ProteinID:
XP_041110651
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All DBs
Position
7:16350377..16361493
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AA seq
424 aa
AA seq
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MSLYDDLGVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRSKQSSVLAPVIDLKRG
SSSDDRQIQDTPPHIAAGLKDPVPSGFSSGEVLIPLADEYDPMFPNDYEKVVKRHREERQ
RQRELERQKEIEEREKRRKDRHDATPTGFSRRPDPESDEDEDFERERQKRGMGGAAIAPP
TSLVEKDRELIAATYPYEEEARPRIPSSKAAIPPPMYDEPERPRSPPGPTNSFLANMGGT
VAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDVADKSAAASQPIVPVS
EMNTWNTVDASKKSDGNPLTEILKFPTKVVLLRNMVGSGEVDEDLEGETKEECEKYGKVV
KCVIFEIPGVNDDAAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDL
GEQM
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtccctttatgatgacctcggagttgagaccagtgattcaaaaactgaaggctggtcc
aaaaacttcaaactgcttcagtcccagcttcaggtaaagaaagcagcactcacacaggca
aagagtcagcgctcaaagcagagttctgtcctcgccccggtgattgatttgaaaagaggc
agctccagtgatgacagacagattcaggatactcctccacacatagctgctggattaaag
gacccagtgccaagtggattctcatcaggagaggtgttgatccccttagctgatgaatat
gaccctatgtttcccaacgactatgagaaggttgttaaacggcaccgagaagagaggcag
agacagagagagctggagagacagaaagagattgaagagagagaaaagaggcggaaagac
agacatgacgcaactcccactggattctccaggaggccagatcctgaatctgacgaagat
gaggactttgaaagagagagacagaaaagaggtatgggaggagcagcaatcgcaccacca
acatccctggttgaaaaggacagagaacttattgctgcaacatatccatatgaagaagag
gccaggcctcgtattccctcttctaaagcagcaatccctcctccaatgtatgatgaacca
gagagaccccgctcaccgccagggcccaccaattcctttcttgctaacatgggaggcact
gttgcccacaaaatcatgcagaaatatggtttccgcgagggtcaaggtcttggaaaacat
gaacagggtctgagtactgccctctctgtagagaaaacgagcaagagaggaggaaagatc
atcgtcggcgatgttgcagacaagtcagcagcagcaagtcagcccatagtgcctgtgagc
gaaatgaacacatggaacacagtggatgcatctaaaaaatcggatggtaacccattaaca
gagatcctgaagttccctacaaaagttgtgttactgaggaatatggtgggcagtggagaa
gtggatgaagacctagaaggtgaaaccaaggaggaatgtgaaaaatatggcaaagttgtg
aaatgcgttattttcgagattcctggagtaaatgatgatgcagctgtgagaatattccta
gaatttgaaagggtggagtctgccataaaagctgttgttgacttaaatggaagatacttt
ggaggacgtgtggtcaaagcgtgtttctacaacctggataaatttagagtcttggacctc
ggtgaacagatgtga
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