Polyodon spathula (Mississippi paddlefish): 121318262
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Entry
121318262 CDS
T07273
Name
(RefSeq) transcription initiation factor TFIID subunit 3-like
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121318262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121318262
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121318262
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_UBR7-like
AphA_like
PHD_Pygo
Motif
Other DBs
NCBI-GeneID:
121318262
NCBI-ProteinID:
XP_041110671
LinkDB
All DBs
Position
7:16658611..16715490
Genome browser
AA seq
946 aa
AA seq
DB search
MCESYSRSLLRVSVAQICQALGWDSVQLTACDLLTDVLHRYIQQLARGCHRYSELYGRTD
PMLDDVGPAFKLMGVSLNELEDYVHNLEPVGFAHQIPLFPVSKNNVLQFPQPGTQDAEER
KEYIPDYMPPIGSSQEEEEEEQVPTDGGTSAEAMQVPLEEEEEMEEEEDVNDENFLGKRP
LGSPDSMEMPVMKRPRYAGLKTESPEGGMEPREPLISINPQKVPPMHTPVNTHDSSGSLS
RSPEPLVLAPPSKTQLPTPKTDSKHGTPRAKPKITSPGQKIKSPKGSNLTSATGSPIRSP
KSGPKEKKSPGRTKSPKSPKVSSHSTAKVDTPTRTPLAALSEKMGKENIHSKQGQATCES
EKQTTDNQLKTFSVADNTIDDSIDAVIAWACAEREPDPFAFSSGSESEGEILTSPRRLTI
SEPTTPKLMLSTNSINKGNSTPVPSSSDNSWTMDDSINEVIRKVNLGTPSSVPSNPPYLS
SPSASPPTPEPLLKVYEEKTKLAASADVKRKLKKELKTKMKKKEKEKQKEKEKDRDKEKS
KEKNKEKTREKDKDKDKESNKEAKIQWKDFIKEEDHEPIKFKLKDFEEVDTKAKIKEGGS
KKDKEKRKDKKKDKEKSKKDKEKKEKGKDKVKLEKLKIPSVPLLMSLKETSLPLFSTPTG
VRISSMLPSLSSMLPEKLFEEKEKPKDREKKKEKKEKKKKKEKEKDKDKDKEKEKVKEKE
KEKEKEKEKKEKEKKEKEKEKHKHEKIKTEPSVTALTPVIPRLTLRVGAGQDKIVISKVV
STPEVKTPVSKTPVPKTPVTVSRPKTPPPPPPPVPIPVHTAIPPAPALQPPPPPPPAAAS
PAAVPPSLPAVPAAGSSKTPVRSVVTETVSTYVIRDEWGNQIWICPGCNKADDGSPMIGC
DGCDDWYHWPCVSITAAPPEEVQWYCPKCANKKKDKKHKKRKHKAH
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagagctactcccggtcgctgctgcgggtgtcggtggcgcaaatctgccaggct
ctcggctgggactcggtccagctcaccgcctgcgatctcctgaccgatgtcctgcacagg
tatatacagcagttggccaggggctgccatcgatactccgagctctatggccgaacggac
cccatgttagatgatgtgggaccggcattcaaactgatgggagtgagcctaaatgaactt
gaagattatgtccacaatcttgaaccagttggctttgcacatcagatcccattgttccct
gtcagcaagaacaacgtcttgcagtttccccagccaggtacccaggatgctgaggagagg
aaggagtacattcctgattatatgccaccaatcggttcctcacaagaagaagaggaagag
gagcaggttcctacagatggtggcacctcagcagaagccatgcaggttcctctggaagag
gaggaagaaatggaagaggaagaggatgtcaatgacgagaactttttgggcaagagacct
ttgggaagtcctgactcaatggaaatgccagtcatgaagagaccacgatatgcaggtctc
aaaacagaaagcccagaaggggggatggaaccaagagagcctcttatatctatcaaccct
caaaaggtgccacccatgcacactcctgtaaatacacatgatagttccgggtctttgtct
agatcacctgagcccctggttttggcaccaccctctaaaacacaactgcctaccccaaaa
acagactccaagcatggtactcctagagcaaaaccgaaaataacttcgcccggacaaaag
attaaatccccgaaggggtctaatttgacttctgctactggaagtcctatacgatctcca
aaatctggacctaaagagaaaaaatcaccagggcgaactaaaagccccaaaagtcccaag
gtttcgtcgcattccacagcgaaggtggacaccccaacaagaacacctttagcagcactg
agtgaaaagatgggaaaagaaaatatacattcaaagcaagggcaagcaacatgcgagtct
gagaagcaaactactgataatcagttaaagacattttctgtggctgataacacaattgat
gactctattgacgcagtgattgcctgggcttgtgcggagagggaacctgacccattcgca
ttttcatcggggtcagaatcggagggggaaatccttacaagtcctagacgacttacgatt
tctgagccaaccactcccaagttgatgctaagcacaaatagcatcaataagggtaattca
actcctgttccttctagttcagataactcttggacaatggatgattcaattaatgaggtc
ataagaaaagttaacttgggcactccttcaagtgtaccttccaatcctccatatttatct
tcgccatctgcttcaccaccaactccagaaccacttctcaaggtctatgaggaaaagaca
aagctggctgcttcggcggacgtgaagagaaaactgaaaaaagaactgaagaccaaaatg
aagaagaaggaaaaggaaaaacagaaagagaaggaaaaggacagggataaagaaaaaagt
aaggaaaaaaacaaggagaaaaccagggagaaagataaagacaaggataaagaatccaat
aaggaggccaagatacaatggaaggacttcatcaaagaggaggaccatgaacctatcaaa
ttcaaactaaaggactttgaagaagtggacaccaaggctaaaataaaagaaggtggttca
aaaaaggacaaagagaagcgcaaggataagaagaaagataaagaaaagagtaaaaaggat
aaagagaagaaagagaagggaaaagataaagttaagttggagaagctgaagattccttca
gtgcctctcctaatgtctcttaaggagacctcattgccactgttcagcactcctaccggt
gttaggatctcctccatgttgccttcattgtcatctatgctccctgaaaaactgtttgag
gaaaaggaaaaacctaaagatagggagaagaagaaagagaagaaggaaaagaagaaaaag
aaagagaaagaaaaggacaaggacaaagacaaggaaaaggagaaagtgaaggaaaaggaa
aaggaaaaggaaaaggaaaaggaaaagaaggagaaagagaagaaggaaaaggagaaagaa
aagcacaagcatgaaaagataaagacggaaccttctgttacagctctgactcctgttatc
cccaggctgaccctaagggttggggctggccaggacaagattgtcatcagcaaagtggtt
tctaccccagaggttaagaccccagtttctaagactccagtccctaagacccctgttact
gtcagtcgtcccaagactccgccaccacccccaccccctgtcccgattccagttcacaca
gctatccctcctgctccggcccttcagccaccaccaccaccacccccagcagctgcatcc
ccagctgcagtgccaccttccttacctgcagtgccagcagcaggctcctccaaaacacct
gtcaggagtgtggtgacagaaacagtcagtacctacgtgatccgggatgaatggggtaat
cagatctggatctgccctggctgcaacaaggctgatgacggtagcccaatgattggctgt
gatggctgcgatgactggtatcactggccttgtgtttcgatcacagcagctcccccagaa
gaagttcaatggtattgtcctaaatgtgccaacaagaaaaaagacaaaaaacacaagaag
aggaagcacaaagcacattga
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