Polyodon spathula (Mississippi paddlefish): 121318267
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Entry
121318267 CDS
T07273
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121318267
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121318267
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
121318267
NCBI-ProteinID:
XP_041110695
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Position
7:17429125..17484393
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AA seq
859 aa
AA seq
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MRTKVQNRFEERLESLKRDSDAEQNAAIKLAQERDEIVSKYDKGRDGATVEPWEDANYHL
YKVTDRFGFLHANELPAYDSVEEKQKLQEVERTTKWLKMMKSWDKYKNSEKLLRRIYKGI
PIQLRGEIWGLLLDIPKIKAEKKDFYEKLKQRARVLSPDIRQIDLDVNRTYRDHIMFRDR
YDVKQQALFHVLTTYSMYNTEVGYCQGMSQIAALLLIYMNEEDAFWALVKLLSGQKHAMH
GFFVPGFPKLLRFQEHHERILKKMMPKLKQHLDNQEVFTSLYSMKWFFQCFLDRTPFTLT
LRIWDIYLLEGEKILTAMSYTILKLHKKHLMKLSMEELVEFLQETLSKDFFFDDDFVIDQ
LQNSMSELKRSKLELPPPGKEDEIPKKPLGQMPPEPQPVISNHIVNGQSNSAKSELHSHL
RKKSSPEKDKEKPSNVRGRKDSVEKSTAKQQKPDKHEGRARGSSEAELHKQHGVPAPQTS
GQDSSRQFNNVAANHNSNATSSTRKDFAPRWNKPSEIKLVEAAAKAAADGRSRAVNYSIP
SSSSPDEAQIFFVRPKTRGLIVDETKRGSNASQYDNVFGAEHDFENRVDGLLERSTTRSP
RNESAFVNPSLKSGSPTKMLNSVSVGGQQRSHMHTVQSDSPDQRFHGKPPPSYSVPPGYH
GNSPTRAQYNYSIDVRPDDRKYGTMLPTPADLSPEKTYMNSYPVNSHQFSSSSKANRIMV
TPADRNAQYDSVNSSNYLRQPTKLVGVSVYPQVDYMQEKRKQLNQVSAYRQEHHGQQWSQ
EVDARYMGSVPRSPSFQRAQMDPVQEFNYSAASIDASLRYRTPYPEPPAQSRPLHQTSLN
TQHYRYPTDGHSAQESALL
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgcggactaaagttcaaaatcgatttgaggagcgtctggaaagcttaaagagggattcc
gatgcggaacagaacgctgcgattaagcttgcccaggaaagagatgaaatagtatccaag
tacgataagggaagagatggagcaactgtggaaccctgggaggatgccaactaccatcta
tacaaagtcacagacagatttggatttttacatgcgaatgagcttccggcatatgactca
gtggaagagaagcaaaaacttcaagaagttgagagaactacaaaatggttgaaaatgatg
aagagctgggataaatacaagaacagtgaaaagcttttgagaagaatatataagggaatc
ccaattcagcttcgaggggagatttggggtttgcttcttgacataccaaaaattaaagct
gagaagaaggatttttacgagaaactaaagcagagggcaagagtgctttcgccagatatc
aggcagattgatctagatgtgaaccgcacgtacagggaccatatcatgttcagagataga
tatgatgtaaaacaacaagcgttattccatgttttaactacatattccatgtataacaca
gaagtggggtattgccagggaatgagccaaatcgcagctttgttgctcatctatatgaat
gaagaggatgccttctgggcccttgtgaaacttctatctggtcaaaaacatgcaatgcac
gggttttttgttcctggatttccaaagctcttgaggtttcaggaacaccacgaaaggatt
ttgaagaagatgatgcctaaacttaagcaacacttggacaaccaagaagttttcaccagc
ctttactccatgaagtggttctttcagtgtttccttgatagaactccctttactttaact
ctaaggatatgggatatctacttactggaaggagagaaaatccttacagccatgtcttac
actatccttaaactccacaaaaagcacctaatgaagctgtcaatggaagagctagtggag
ttccttcaggaaacactgtccaaagattttttctttgatgatgactttgtgatagatcag
cttcagaactctatgtcagagttaaaacggtcaaagttagaactgccaccaccaggtaaa
gaggatgaaattcctaagaagccactggggcagatgccaccagagccacagcctgtcatc
tcaaatcatattgtcaatgggcagagcaacagtgctaagtcagaattgcactctcacttg
aggaaaaagtcctctccagagaaggacaaggagaaaccttccaatgtcagggggagaaag
gactcagttgaaaaatccacagctaagcaacaaaaacctgataaacatgaaggccgggct
cgaggttcatcagaagcagaacttcataaacagcatggtgtaccagcacctcagacttca
ggtcaggacagctctagacagtttaacaatgtagcggctaaccataactcaaatgctact
tcaagcacaaggaaagactttgcacccagatggaataaaccttctgaaattaaacttgtg
gaggcagctgcaaaggctgctgctgatggtaggagtagggctgtgaactacagcattcca
agttcatccagtccagatgaagcacagattttttttgtgaggccaaagactagaggtttg
attgttgatgaaaccaaaaggggatcgaatgcatcacagtatgataatgtgtttggagct
gaacacgactttgaaaaccgtgtagatggactgctggaaaggtccactacacgcagtcca
agaaatgagtccgcttttgtcaatccgtcactgaaatctggtagtccaacaaaaatgttg
aacagcgtcagtgtcggtggtcaacagagatctcacatgcacacagtacagtctgatagt
ccagaccaaagattccatgggaaaccccctccatcttattctgttcctcctggttatcat
ggaaactctccaactcgagcacagtacaactacagcattgatgtcaggcctgacgacaga
aaatatggtaccatgctgcccactcctgcagacctatctcctgaaaagacatatatgaac
tcctaccctgttaatagccatcagttttccagctcttccaaggccaatcgtattatggtc
acccctgctgacagaaatgcacagtatgattctgtaaattccagcaactatttaagacag
cctacgaagttggttggtgtgtcagtgtacccacaagtggactatatgcaagaaaaaagg
aagcaactgaaccaggtttctgcatacagacaggagcaccatgggcagcaatggagtcag
gaggttgatgctcggtacatgggaagtgtgccaaggtcaccaagctttcagagggcacag
atggacccagttcaagagtttaactattctgccgcatctatagatgcttcacttcgatac
aggactccatatccagaaccaccggctcagagtagaccgctgcaccaaacctctttgaat
acacaacactacagatatcctacagatgggcattcagcgcaagagtcagcgctgctgtga
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