Polyodon spathula (Mississippi paddlefish): 121318271
Help
Entry
121318271 CDS
T07273
Name
(RefSeq) probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial
KO
K15791
2-oxoadipate dehydrogenase E1 component [EC:1.2.4.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00310
Lysine degradation
pspa00380
Tryptophan metabolism
pspa00785
Lipoic acid metabolism
pspa01100
Metabolic pathways
pspa01210
2-Oxocarboxylic acid metabolism
Module
pspa_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121318271
00380 Tryptophan metabolism
121318271
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
121318271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121318271
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121318271
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
Phage_FRD3
Motif
Other DBs
NCBI-GeneID:
121318271
NCBI-ProteinID:
XP_041110708
LinkDB
All DBs
Position
7:17553779..17568142
Genome browser
AA seq
927 aa
AA seq
DB search
MSAFFLAKTCSLAAKRSPNAIRPLLRNVYHTQRGVYGYKPTKTESGLKLSKTEMNNACIQ
DHGLARLVEAYRAHGHKAARVNPLFSGEAAMDVVPEVQILTEVIDGPFNTSGLLHFGKAE
GSLEDVLQYLNHTYCGHMSIETSQLQTLEEREWFAQRFEELKKEVFTPQERRQLATLMLQ
SQEFDHFLATKFATVKRYGGEGAESMMGFFYELFRLAAYSGVTDVITGMPHRGRLNLLTG
LLQFPPELMFRKIKGLSEFPENSPAIGDVLSHLTSSVDLDFGSGHPLHVTMLPNPSHLEA
INPVTVGKTRGRQQYKQDGDYSPNSSAQPGDKVLCLQIHGDAAFSGQGIVPETFTISNLP
HFRVGGSIHLIVNNQVGYTTPAERGRSSLYCSDIGKMVGCAVMHVNGDDAEEVLRATRLA
MAYQQRFRKDVIVDLLCYRQWGHNELDEPFFTNPAMYKIIRSRKSIPDSYADSLVAEGLL
TEQEISEIKTSYYTKMNEHLTNMTLYSPPPTNLQGHWKELVEPQAKITTWDTGLSTDLLQ
FVGAKSVFIPEDIHLHSHLHRTHKQARLQKLEEGTKLDWSTVEAMAFGSLLCQGFHIRIC
GQDVGRGTFSQRHAMVVCQETNDMYIPLNDIVPEQKGFLEVCNSPLSEEAVLGFEYGMSI
ESPMLLPIWEAQFGDFFNGAQIIFDTFISGGEAKWLLQSGLVILLPHGYDGAGPEHSSCR
IERFLQLCDSKEEGVDGDNVNMSVVNPSTPAQYFHLLRRQMIRNFRKPLIVASPKMLLRF
PGAVSSFSELAPGTTFRPVLGDPSVDPKNVSRVVLCSGKHYYALLKQREASGEAQKNTAL
IRVEELCPFPLEALQQELNQYNNAKDFIWSQEEPQNMGPWSFVAPRFEKQLSCKLRPVSR
PPLPAPAVGIGMVHQQQQQALLSQTFS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccttttttttagcgaaaacctgcagtttagcggcaaaaagatccccaaatgcc
attcggccgcttttacgtaatgtgtatcacactcaaagaggggtttatggatacaaaccc
acgaagactgaaagcggtttgaaattgagcaagacagaaatgaacaatgcctgcatacaa
gatcatggattggctcggctagttgaagcgtacagagcacacgggcacaaagcagcaaga
gtgaaccctttattctccggagaggcagcgatggatgtagtgcccgaggttcagatctta
acagaagtcattgatggacctttcaatacaagtggcttattgcattttgggaaggcagag
ggttcattagaagatgtgttgcaatacctcaatcatacgtactgtggccacatgtccatc
gagacgagtcaactgcagacactggaggagagggagtggtttgctcagaggtttgaggag
ctgaagaaagaagtattcactccacaggagaggagacagctggctacattaatgctccaa
tcccaggaatttgaccacttcttggctaccaagtttgccacagtgaagcggtatggtgga
gaaggggcagagagcatgatgggattcttttatgagctctttcgtctcgctgcttacagt
ggagtgactgatgtcatcacaggcatgcctcacagaggaagactaaacctcctaacgggc
ctccttcagttcccacccgagctgatgtttcgtaagatcaaagggctgagtgagtttcct
gaaaactccccagccattggagacgtgctgtcgcatctgacctcctctgtggatctggat
tttggctctgggcaccctctccacgtgaccatgctgcctaacccttctcacctggaggcc
attaacccagtcactgtgggaaaaactcgaggaaggcagcaatacaagcaagacggggac
tattcccctaacagctcagctcagccaggagacaaagtcctctgcctgcagatccatgga
gatgccgcattctctggccaaggaattgttcctgagacattcactatttcaaacctcccc
cactttagagtaggtggaagcatccatctgattgtaaataaccaagtgggttataccact
ccagctgagagaggaagatcctcattgtactgcagtgatattggtaagatggttggctgt
gctgtgatgcacgttaatggagatgatgcagaggaagtgcttcgagctacccgattggcc
atggcatatcagcagagattccgtaaggatgtgattgtcgatctgctgtgttacagacag
tggggtcataatgagctggatgagcctttctttaccaatcctgccatgtacaaaataatc
agatcccggaagagtattcctgactcatatgcagacagcttggtagcagaaggactcctg
accgagcaggaaatttcagagataaagacgtcgtactacaccaaaatgaacgagcacttg
accaacatgacactgtacagcccacctcccaccaacctgcagggccattggaaggagctg
gtggagcctcaggctaagatcacgacctgggacacggggctctccactgacctgctgcag
ttcgtgggagccaagtctgtattcatccctgaggatatccacctccacagtcatcttcac
aggacgcataagcaggccagactgcagaaactggaagagggaacaaaattagattggtct
actgttgaagcaatggcatttggttcccttctctgtcaagggtttcatatacgtatctgt
ggacaggatgttggacgtggtactttcagccagcgtcatgcaatggtagtctgtcaggaa
accaatgatatgtacatccctctcaatgacatagtgcctgaacaaaagggtttcttggag
gtatgcaacagtcctttgtctgaagaggctgtccttggttttgaatatggaatgagcatt
gagagcccaatgctgttaccaatctgggaagcccagtttggagatttttttaatggagct
caaattatatttgacacctttatctcaggaggtgaagctaagtggctgcttcagagtggc
ctagttatcctgctaccacacggatacgatggtgcaggcccagaacattcctcctgtcgt
attgagcggttcctgcagttatgtgacagtaaagaggagggtgtggatggagacaatgtc
aatatgtcagtggtaaatccctccactcctgcgcagtattttcacctgttgcgtagacag
atgatccggaactttcgcaaacccctgattgttgcttctcccaaaatgctcctccgcttt
ccgggtgctgtgtcaagcttttcagagttggctccagggacaactttcagaccagttctt
ggtgacccatctgtggatcccaaaaatgtgagtagagtggtattgtgctccggcaagcac
tactatgccctgcttaaacagagagaggcgtctggagaggctcagaaaaacactgccctg
atccgagtggaggagctttgcccattccctttggaggcgctgcagcaagagctgaaccag
tacaataatgcaaaagattttatttggagtcaggaagaacctcagaacatgggaccatgg
tcttttgtagccccaaggtttgaaaaacagttgtcatgtaagcttcggcctgtcagccgg
cctcctctgccagcacctgccgttgggattggaatggtccaccagcagcagcagcaagct
ttactgtctcaaacattttcttaa
DBGET
integrated database retrieval system
