Polyodon spathula (Mississippi paddlefish): 121318314
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Entry
121318314 CDS
T07273
Name
(RefSeq) S-phase kinase-associated protein 2-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04068
FoxO signaling pathway
pspa04110
Cell cycle
pspa04120
Ubiquitin mediated proteolysis
pspa04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121318314
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
121318314
04150 mTOR signaling pathway
121318314
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121318314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121318314
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121318314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
DUF7885
LRR_NXF1-5
LRR_At5g56370
LRR_4
LRR_6
LRR_R13L1-DRL21
LRR_8
Motif
Other DBs
NCBI-GeneID:
121318314
NCBI-ProteinID:
XP_041110772
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All DBs
Position
1:38084001..38093541
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AA seq
416 aa
AA seq
DB search
MFRERKHLQELPSSSGNLRKWTQLQETKTTHKAPFVDNCENECTPHDLIQSWSPPQKRPK
ICKGKENEDVSFVLARRPRKKRECEAVISWDSLPDELLLRIFHGLPLVDLLKVSRVCKRW
HCLAFDESLWYSVDLTGKALLAPALSQALSVGVVALRCPRTCIGIPSLKNLRSLRVQHLD
LSSCTMSVAVLEDVIGRCCRLRNLSLEGLVLSDQVLICLAQNPELLRLNLSGCSGFSAHS
LGEMLHHCTRLEELNLSWCEFTSDHVKAAVNNIPESVTQLNLSGYRQNLHIADVEVLVER
CPNITNLDLSDSVLLTSDSFQHFCKLPALHHLALSRCYQIHPAALVDFENFPSLKMLEVF
GILQDTSLPILTKGLPHIKINSCYFTTIARPTVGSKNSRDIWGISCRLTYRAPFTS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtttagagaaagaaagcaccttcaggagctcccctcctccagtgggaacttgcgaaag
tggacacagctgcaggaaaccaagacgacacacaaggcccctttcgtggacaattgtgaa
aatgagtgcactcctcacgatctgatacaaagctggtctcccccgcagaaaagacccaaa
atctgcaaagggaaagagaatgaagacgtctcctttgttctcgctcggaggccaaggaaa
aagagagaatgcgaagcagtgatttcctgggacagcctaccagacgagctgctactgaga
atatttcatggccttccgttggttgacctactgaaggtttcccgagtgtgtaaacgttgg
cactgcctggcgttcgatgagtctctgtggtacagcgttgatttgaccggaaaggcactg
cttgcgcccgccctcagtcaggccctgtcagtcggggtggtggccttgcgctgccccagg
acctgcataggcataccttctctcaaaaacctaaggtcactgcgtgttcaacatctggat
ttatccagctgcaccatgagcgtagcagtgcttgaggacgtcattggccgttgctgcagg
ctccggaacctcagtttggagggactggttctttcagatcaagtcctaatatgtttagca
cagaaccctgagctgctgcgattgaacttgtctgggtgttcaggattctctgcacattca
ctgggagagatgctccaccactgcacgcgcctggaagagctgaacctgtcctggtgtgaa
ttcacttcggaccatgttaaagcagccgtgaacaacattcctgaaagtgtcacacagcta
aacctcagcgggtaccgccagaacttgcacattgctgatgtggaggtattagtggagaga
tgtccaaacattactaacctagatttgagtgacagtgtcttgctgacatcagactctttt
cagcatttctgcaaactcccagccctccatcatctagccctgagccggtgttaccagatc
cacccggcggccctggtggattttgagaactttccctctttgaagatgctggaggttttt
gggatcttgcaggacacaagcctaccgattttgacaaaaggcctgccgcacattaaaatc
aactcctgctattttaccaccatcgcccgacccactgtgggaagcaagaacagcagggac
atctggggcatctcctgcaggctgacctacagagctccgttcacctcatag
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