Polyodon spathula (Mississippi paddlefish): 121318331
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Entry
121318331 CDS
T07273
Name
(RefSeq) ATP-binding cassette sub-family D member 2-like
KO
K05676
ATP-binding cassette, subfamily D (ALD), member 2 [EC:
7.6.2.4
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa02010
ABC transporters
pspa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121318331
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121318331
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121318331
Enzymes [BR:
pspa01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
121318331
Transporters [BR:
pspa02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD2 subgroup
121318331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
Rad17
AAA_29
AAA_23
ORC-CDC6-like
Adeno_IVa2
SMC_N
AAA_27
ARID
nSTAND3
ATPase_2
RVP
AAA_22
AAA_5
Motif
Other DBs
NCBI-GeneID:
121318331
NCBI-ProteinID:
XP_041110796
LinkDB
All DBs
Position
7:20428452..20451283
Genome browser
AA seq
739 aa
AA seq
DB search
MSNILHAGAKVKWNQSAAAKRAAFLVAAVYGVKTLYPIICKQINKRSEPVKSTACTSEKK
NGLLLQGSEIASTRSPGVNAEFLNQILQLVKILFPKIVTKELGLLCLHSLALISRTFLSI
YVAGLDGKIVKTIVEKKPRSFVIKLMKWLLIAIPATFVNSVIRYLECKLALTFRTRLVDH
AYKTYFTNQTYYKVTNMDGRLANPDQSLTEDIMMFSQSVAHLYSNLTKPILDVILTSYTL
IQTARSRGANASGPTLLAGLVVYATAKVLRACSPKFGKLVAEEAHRKGYLRYVHSRIIAN
AEEIAFYRGHKVEMKQLQKCYKALADQMHLILSKRLWYIMIEQFLMKYVWSSCGLVMVAV
PIITATGFADNELENGQTQVLVSERTEAFTTARNLLASGADAIERIMSSYKEVTELAGYT
ARVHNMFLVFDEVQKGVYKRSTVTQTAASDNTKAAKPEMHITGPLEINGHVIDVDNGIIC
ENVPIITPNGDVVASSLNFKVEEKMHLLITGPNGCGKSSLFRILSGLWPVYGGLLYKPPP
QHMFYIPQRPYMSIGTLRDQVIYPDSVEDMHDKGYRDLDLEIILDIVTLNQIVQREGGWD
AVTDWKDVLSGGEKQRMGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGISLLS
ITHRPSLWKYHTHLLQFDGEGGWRFEQLDTATRLSLTEEKQRLESQLAGIPKMQHRLNEL
CKILGEDSVLKTTAREGEE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatattttacatgcaggcgctaaagtgaaatggaaccagtcagctgcagcaaaa
cgagcagcgtttcttgtagctgctgtctatggagtgaaaacactgtaccctataatttgc
aagcagatcaacaaaagatcagagccagtgaagtcaacagcctgcacatcagagaaaaaa
aacggattattattacaaggatcagaaatagcatcaacaagatctccgggtgtaaatgca
gagtttcttaaccagattcttcaacttgtaaaaatcctcttcccaaagatcgtcactaaa
gagctggggttgctttgcttgcattctttggcgttaatctccagaacatttttgtctatt
tatgtggccggtttggacggaaaaatcgtgaagactatagttgaaaagaagccgaggagc
ttcgtcatcaaattaatgaaatggcttcttatagccataccggccacatttgtcaatagc
gtaatacgttatttggagtgcaagcttgctttgacctttcgcactcgccttgtggatcat
gcgtataaaacatattttacaaatcagacatactataaagtcaccaatatggacgggaga
ctggcgaatccagaccagtccctcactgaggacatcatgatgttttcacaatcggttgca
catttgtattccaaccttaccaaaccaattttagatgtgatactaacctcttacaccctc
attcaaactgctagatcaaggggggccaacgcatcaggaccaaccttgttagctggatta
gtggtgtatgctacggcgaaggttctgagagcatgctccccgaaatttgggaaactggtg
gcagaggaggcacacaggaaaggttacttgcgttatgtgcattcccgtatcattgccaat
gctgaagagattgcattttatagagggcacaaggtagagatgaagcagctgcagaaatgt
tacaaggcccttgctgatcagatgcacttaattttgtcaaagcgcctttggtacatcatg
atagagcagttcctgatgaagtatgtgtggagcagctgtggcttagtcatggtggcagta
cccataatcacagccactggttttgctgataacgagttagaaaatggacaaacacaggtt
ttggttagtgaaagaactgaagctttcactacagcccgtaaccttctggcctccggagct
gatgctattgagagaataatgtcttcctacaaagaggtcactgaacttgcgggctacact
gctcgagtccataatatgtttttggtcttcgatgaagtacagaaaggagtttacaagaga
tccactgttactcagactgctgcatcagacaacacaaaggcagctaaacctgaaatgcac
atcactggcccccttgaaatcaatggacatgtcattgacgtggataacggaatcatatgt
gaaaatgttccaatcatcactcccaatggtgatgtggttgcttccagcttaaattttaag
gtggaggaaaagatgcatctcctaatcactggtcctaatggctgtggcaagagttcttta
ttcaggattctgagtggtctgtggcctgtctatggcgggcttctatacaagcctccgccc
cagcacatgttctatattccacagagaccctacatgtcgataggaactttgcgggatcaa
gtcatataccctgattctgtagaagacatgcatgacaaaggctacagagacctggaccta
gaaatcattctggacattgtcactttgaatcagatagttcagagagagggtggttgggat
gcagttacagattggaaggatgttttgtctggtggagagaaacagaggatgggcatggca
aggatgttttatcacagaccaaaatatgctttactagatgagtgtacaagtgctgtcagc
attgatgtggagggaaagatttttcaggctgcaaaggatgctggaatttctcttctttct
atcacacataggccgtccctctggaagtaccacactcacctcctgcagtttgatggtgaa
ggcggttggcgttttgaacagctggatacagcgactcgactctccctcacagaggagaaa
caaaggcttgagtcacagctcgccgggattcccaaaatgcagcatagactcaatgaactg
tgcaagatcctgggggaggactctgtcctcaagactactgctcgtgagggtgaggagtaa
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