Polyodon spathula (Mississippi paddlefish): 121318346
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Entry
121318346 CDS
T07273
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24640
zinc finger BED domain-containing protein 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121318346
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
121318346
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Flu_PB2_4th
Motif
Other DBs
NCBI-GeneID:
121318346
NCBI-ProteinID:
XP_041110839
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Position
7:21866157..21876773
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AA seq
1301 aa
AA seq
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MDSEEDLSYNSEDTSSKHDDFTEDNGKPQNTKGSVDIKDKPGHSECENVHTGYTNTLCDA
AVYANSFATSPGTLAKESCSVTSPERLSDMPPELASGQSTIDTPTAILPSPEWVCEKDIQ
TITSTSDVKTKGPVLNDDQGSVLQQNKKTMKRKTETIDDETSEKVNKTKNIKEESENCIN
DSSEEKSETFIGSPGRFVARENDEYGNLLTGYTSTLYDVAMDAVTQSLLSSMRNNVNPRK
KSPAWNHFLISPRDNTKAICMYCMKEFSRGKNEKDLSTSCLMRHVRRAHPTVLLQDSECS
SNSIPNSVATSVLPPINPPNNGELASQKNTSMVCSPDEMEETPPKEEFPTTPISDKCVKD
ETGMASSPYSSNNHNEDAMENQSVTPKNSNSRRRSAVWKHFYLSPADSSKAVCIHCMNEF
SRGKNGKDLGTSCLIRHMWRAHRDIVIEENGNGSSIPPHYSTPPTLLPTFQLPDTGDSKL
KKDSHFITSSPEGMTDEVPQNINESMDIKEEPDDALYHLSTGQALIDTPVTALSFPEGVS
EKDILLTSSPDDLSEGPSLNKDQSSVFQQNKKIMKRVKSEVWHHFIVSPVDHLKALCRYC
PCVISRGKRGDFGTSCLMRHLMRRHPNVLKNQKGTFENIPSSPRSPYATLAAAEALSSKI
TENSSMVEEKPHILPVTSKKTSKLWNHFSICTTDPTNVVCLHCSRTISRGKKTTNLGTSC
LFRHMQRFHGNVLENKGNVSRVMVSSSVDLQARSDSMETTTATTSEDSNERYNEYHPIAK
KITKLVAEMLALDLQPPSLVENDGFNRLLEYLQPQYSIPSSTYFSSTAIPEMYESVKEVI
VSHLKEAEGGIVHFTAGIWVSNQTHEYLTLTAHWATFESSVRPQGQDFHCSALLNVSQID
CDYNLTDIKKQIEYLWDTWIISSGLKIGFTVTDNQSIANILDDNEQASMQCFGHTIDLIV
SEAIKSQRMVQNLLSTARKICERVHRSAKAKEKLAELQKAHDLPENQLVQDIPSKWNTSF
YMLERLVEQKKAIDELSIECNFRELISCDQWEVMQSVCHALKPFEVVCREMSTRTATLGQ
VIPLIHILNRKIDMLFDETMGIDNMLKSLKDGMVSRMSSALHDPRYVWATMLDPRYKTSL
FTEEEAEQYKHELVKELDLSYSTSGERKPIVSNGCSEVPAPSNSGPSNKDNLWALMDDIR
NKIREERPKSSELTVLEYLEEEIVDQSCDPLDYWNLKKFLWPDLAKIAIRYVGCPPSIIP
AETLFSTASKSCSLNQTRSMLENIERRIFLKVNLPLIYFQY
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgaggaggatttgtcttataacagtgaggatacaagttcaaaacatgatgat
tttacagaagataatggaaagccacaaaatacaaagggaagtgttgatattaaagacaaa
cctggccattctgaatgtgaaaatgtgcatactggctacactaatactctttgtgatgca
gcagtttatgccaattcttttgcaacttcaccagggacattggctaaggaatcctgctct
gtgacctctcctgaaaggctgtctgatatgcctcctgagctggcttctggacaatcaaca
atagacacaccaacagcaatattgccttctccagaatgggtgtgtgagaaagacattcag
actataacctcaacttcagatgtaaaaaccaagggtccagttttgaatgacgaccagggt
tcagttttacagcaaaacaaaaaaactatgaagagaaaaactgaaacaattgatgacgag
acatcagaaaaagtcaacaaaaccaaaaatattaaagaggagtcagaaaattgcataaat
gacagtagtgaggaaaagagtgagaccttcattggttcacctggcagatttgttgctaga
gaaaatgatgaatatggaaatttgcttaccgggtacactagtacactttatgatgtagca
atggatgctgttacacaaagtcttctgtcatcaatgagaaataatgttaacccaaggaaa
aagtcacctgcttggaatcattttttaatatccccaagagataataccaaagcaatctgt
atgtactgcatgaaagagtttagtcggggtaagaatgaaaaagacttgagcacaagttgt
ctaatgaggcatgtgcggagggctcatcctacggtacttttacaggacagtgaatgctct
tcaaattccattcctaattcggttgctacctctgtgttgcctcccataaatccacccaat
aatggggaactagcatctcaaaagaatacttccatggtatgttcaccagatgagatggaa
gagactccacctaaggaagaatttccaacgaccccaatatcggacaagtgtgtcaaagat
gagactggcatggcttcttccccatattccagtaataaccataatgaagatgcaatggag
aatcagtctgtcactccaaaaaattcaaactcaagaagaagatctgctgtttggaaacat
ttttatctatctcctgcagacagttcaaaagcagtgtgtatacattgtatgaatgaattc
agccgcgggaagaacggaaaagacctgggaacaagctgtcttataagacacatgtggaga
gcccaccgtgacattgttatagaagagaatggaaatggttcaagtattccaccacattat
tcaacaccccccactttgttaccaacgttccagctcccagacacaggggattcaaaatta
aaaaaagattcccatttcataacctcttctcctgaagggatgactgatgaggtgccacag
aatatcaatgaaagcatggacattaaagaggagcctgatgatgcactttatcacctgtct
actggtcaagcattaatagacacaccagtaacagcactgtcttttcctgaaggggttagt
gagaaagacattttgcttacctcatcgcctgatgatctgtctgagggtccaagtttaaat
aaagaccagagttcagtcttccagcaaaataagaaaattatgaagagagtgaaatcagaa
gtgtggcatcatttcattgtatctccagttgatcatcttaaggctttatgtagatattgc
ccctgtgtcattagcagaggaaaaagaggggattttggcacaagctgtttgatgagacat
ctgatgaggcgtcatcctaatgttctcaagaaccaaaaaggcacatttgagaatattcct
tcatctcctcgatcaccctatgctacactagctgctgcagaagctctgtcatctaagatt
actgaaaactcctccatggttgaggaaaagccacacatattacctgttactagtaaaaag
acatctaaattgtggaatcatttttctatctgtactacagatccaacaaatgttgtgtgt
ttgcactgtagtcgcacaataagcagaggaaaaaagactaccaacctcgggacaagttgc
ttgttccgtcacatgcagagatttcatggaaatgttcttgaaaacaagggcaatgtctca
agagttatggtatcttcctctgtagacctccaagccagatctgattcaatggaaactact
actgctactacatctgaagacagcaatgaaagatacaatgaatatcatccaattgccaaa
aaaattaccaaacttgttgctgaaatgcttgcattggaccttcaaccaccatcccttgtg
gaaaatgatggatttaacagattactggaatatcttcaaccacagtattccataccttca
tcaacctatttttccagcacagccatacctgaaatgtatgagagtgtgaaggaagtaatt
gtttcacatcttaaggaggctgaaggtggcattgttcatttcacagctggaatttgggtt
agcaatcagacacatgagtacttgacacttactgctcactgggcaacctttgaatcatct
gttcgacctcaagggcaagatttccactgttctgctcttctgaatgtttctcaaattgac
tgtgattacaatctcacggacattaagaaacagatagaatacttgtgggacacatggatt
atatcctctggtctgaaaattggcttcactgtaacagataatcagagtattgcaaatatc
cttgatgacaatgaacaagcaagcatgcagtgttttggacatactattgatctcattgta
agtgaagccataaagagtcagagaatggttcaaaatctactcagcactgcaagaaaaatt
tgtgagcgcgttcatcgttcagcaaaggcaaaagagaaattggcagagttgcaaaaagcg
cacgacttgcctgaaaatcagctagtccaggatatcccttccaagtggaatacgtctttt
tacatgcttgaacgtttagttgaacagaagaaagcaatcgatgagttgtctatagagtgc
aacttcagggaactgatcagttgtgatcaatgggaagtgatgcagtccgtgtgccatgct
ttaaaaccttttgaggttgtctgcagggagatgagcacccgaacagctacacttggacaa
gttattccattgattcacattctaaacagaaagatagatatgttgtttgatgaaaccatg
ggtatagacaacatgctaaaatctttgaaagatggcatggtgagccgaatgtcctctgca
cttcacgacccgaggtacgtctgggctactatgttggacccccgttataagacctcatta
tttacagaggaagaagcagaacagtataaacatgaactggtcaaagaactagatttatca
tattctacctcaggagagagaaagcctattgtttctaatggctgtagcgaagttcctgct
ccatctaacagcggtcccagtaacaaggacaacctgtgggccctaatggatgatatcaga
aataaaataagagaggaaagaccgaagtcttcagaactgaccgtacttgagtacttggag
gaagaaatagtggatcaaagctgtgatcctcttgattactggaacctgaagaagttccta
tggcctgaccttgccaaaatagctattagatacgtgggatgccccccaagcatcattcca
gcagagacactgttcagtacagccagcaagagctgtagcctgaatcaaacaaggtcaatg
ctggagaatatagaaagacggatctttttaaaagtaaaccttcccctaatatattttcag
tattga
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