Polyodon spathula (Mississippi paddlefish): 121318367
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Entry
121318367 CDS
T07273
Symbol
fbxl13
Name
(RefSeq) dynein regulatory complex subunit 6
KO
K10279
dynein regulatory complex subunit 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121318367 (fbxl13)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121318367 (fbxl13)
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121318367 (fbxl13)
Cilium and associated proteins [BR:
pspa03037
]
Motile cilia and associated proteins
Nexin-dynein regulatory complex
121318367 (fbxl13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_At5g56370
LRR_8
F-box
LRR_EndoS
LRR_Zer-1
DUF6075
PriX
Motif
Other DBs
NCBI-GeneID:
121318367
NCBI-ProteinID:
XP_041110877
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Position
7:complement(23149274..23205733)
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AA seq
794 aa
AA seq
DB search
MTSLQSADPALKNYIIRNSLPEIYESLLIGLCYMCPADPLQFLEEKIKEMLEKGHLGIAS
DTFIDETRKVQLPVTKRTGMHLQQLFGFEEDLMVSSHLYEAAFSFYQRSLMKMCFDAWVK
FISMKREQEIEMAEKMNIAEQHFAGTLLKMTLLKWNEWQKFRKKEKAEAVEKIQAVFHTH
LCKQVFKSWQELVQDSKKKKDYFEHLNRGPVDHNLGEINTATEESKDDISMLPKRAALKI
FSFLDIADLARCAQVCQSWKIISHSSSLWSRIDFSPVNNMMADSTAVNILQKYRPYVIHL
NFRRSAFLQWPSFKCISECRNLQDLNLSECASVNDEIMRLILEGCPALLYLNLSYTNVTN
GTLRMLSRCCLNLQYLSLAYCRKFTDKGLQYLATGKGCHKLIYLDLSGCTQMSVDGFKNI
AVGCSELQQLEINDMPTLTDRCILAIVSECQNLQTVSLQDSTHLSDTAFKAMAQASKLTK
IKIRGNNRMTDASWKSFCKTSPSLCHIYAADCQKITDISLKAIAALKNLTVLNVADCIRL
SDPGIKYLVEGPSAGKLREMNLTNCVRVSDMSLLRISQRCLKLTYLSLCYCEHLTDSGLE
LLAGLPSLTSLDLTGTNIQDQGLASLATNTGIKKLTLAECLWITDLGIQKLCQKSRDLEH
LDISHCLSLTDKTIKSLAFYCQTLTSLNIAGCPKMTDLYMHYLTGVCQYLHELDISGCVH
ITDKTTKYLQNSCKQLRVLNMLYCKNITRQAALKVTARVQCWEYSNEDPPACFGYDSLGS
ISDSIHQENQEQEE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgttacagtccgctgatcctgccctgaaaaactatatcattcgcaattcactc
cctgaaatatacgagtcattgctaattggattatgttatatgtgccctgctgatccgtta
caattcttggaagagaaaattaaagaaatgctggaaaagggccatcttggaattgcttcg
gacacttttattgatgaaacacgtaaagtccagttgccagtgacaaagaggacaggaatg
catttacagcagctctttggatttgaggaagatctgatggtgtcatctcacttgtatgag
gcagcattctctttttaccaaagaagtctaatgaaaatgtgctttgatgcttgggtaaag
ttcatttcaatgaaacgagaacaggaaatcgaaatggctgaaaagatgaacattgctgag
cagcattttgccggaacgttgttaaaaatgacactgcttaagtggaatgaatggcaaaaa
tttcgtaagaaggaaaaagctgaggcagtggagaaaattcaggctgtttttcatacacat
ctgtgcaagcaagttttcaaatcatggcaagaattagtacaggattcaaaaaagaaaaaa
gactactttgagcatttgaatcgaggaccggtggaccataacttgggtgaaataaatact
gctacagaagaaagcaaagatgatatctccatgttaccaaaaagagcagcattgaagatc
ttcagtttcctagatattgctgacctagcacgatgtgctcaagtatgtcaatcttggaaa
ataataagccacagtagttccctttggagcaggattgacttttctccagtaaataacatg
atggcagacagcacagcagtaaatattctacaaaagtatcgcccatatgtaattcatctg
aactttcgcagatctgctttccttcaatggcccagctttaaatgtatcagtgaatgcaga
aatttgcaggacctaaatctttcagagtgtgcaagtgtaaatgatgaaatcatgagactg
attttggaaggctgcccagcactcctgtacctcaacttgtcttacacaaacgtgactaac
gggactctcagaatgctatcaaggtgttgcctaaatttacagtacctcagcctagcctac
tgcaggaagtttacagataaagggttacagtacctggccacagggaaaggctgccacaaa
cttatctacttggacctttctggctgcactcagatgtcagtggatggattcaagaacata
gcagtgggctgcagtgagcttcaacaactggaaatcaatgacatgcctacactcacagac
agatgtattctggctatagtttctgagtgtcagaatctgcagacagtttctcttcaagac
tccactcacctttcagatactgcatttaaggccatggcacaggcatccaagcttacaaaa
atcaagattagaggtaataatcgtatgactgatgcgagctggaagtccttttgcaagact
tcccccagtctgtgccacatctatgctgctgactgccagaaaatcactgacattagtcta
aaagcgatagcagccctgaagaatctgactgtgctgaacgtggccgactgcattaggttg
agtgatccaggaattaaatatcttgtggaaggcccttctgctgggaagctcagagaaatg
aacctgacaaactgtgtccgtgtcagtgacatgtctctgttgagaatatcacaaaggtgt
cttaaactaacttatctgagtctatgttactgtgaacacctgactgattcaggacttgag
ttgttggcaggcttgccatcactgacttcgcttgatttaacaggaacgaacatccaggac
cagggtttggcatctcttgccaccaacactggcataaaaaagctcaccttggctgaatgc
ttatggatcactgatttgggaattcagaaattgtgccaaaagtctagggatctggaacac
cttgacatctctcattgcctttcactgacagataagacgattaaaagcttagccttttat
tgccagacactcacctcactcaacattgctggatgtccaaaaatgacagatctgtacatg
cactatttaacaggagtgtgtcagtacctccatgagctggatatctctggctgtgtccat
attactgacaagacaaccaagtacttgcagaacagctgtaaacagctgcgtgttctcaac
atgctttactgcaaaaacatcaccagacaagcagctctgaaagtaacagccagggttcaa
tgctgggaatacagtaatgaggacccccctgcttgctttggatacgattccctgggtagc
atctcggattccatccatcaagaaaaccaagagcaggaggaataa
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