Polyodon spathula (Mississippi paddlefish): 121318388
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Entry
121318388 CDS
T07273
Name
(RefSeq) inositol 1,4,5-trisphosphate receptor type 2-like
KO
K04959
inositol 1,4,5-triphosphate receptor type 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
pspa04070
Phosphatidylinositol signaling system
pspa04114
Oocyte meiosis
pspa04210
Apoptosis
pspa04218
Cellular senescence
pspa04270
Vascular smooth muscle contraction
pspa04371
Apelin signaling pathway
pspa04540
Gap junction
pspa04621
NOD-like receptor signaling pathway
pspa04625
C-type lectin receptor signaling pathway
pspa04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121318388
04020 Calcium signaling pathway
121318388
04070 Phosphatidylinositol signaling system
121318388
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
121318388
04210 Apoptosis
121318388
04218 Cellular senescence
121318388
09144 Cellular community - eukaryotes
04540 Gap junction
121318388
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121318388
04625 C-type lectin receptor signaling pathway
121318388
09152 Endocrine system
04912 GnRH signaling pathway
121318388
09153 Circulatory system
04270 Vascular smooth muscle contraction
121318388
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121318388
Ion channels [BR:
pspa04040
]
Ligand-gated channels
IP3 receptor
121318388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ins145_P3_rec
RYDR_ITPR
MIR
RIH_assoc
Ion_trans
SPO22
Sec2p
DUF3567
C_GCAxxG_C_C
Motif
Other DBs
NCBI-GeneID:
121318388
NCBI-ProteinID:
XP_041110921
LinkDB
All DBs
Position
7:complement(24133073..24276154)
Genome browser
AA seq
2661 aa
AA seq
DB search
MSEPRSSFLHIGDIVSLYAEGTVNGFISTLGLVDDRCVVQPDAGDLANPPKKFRDCLFKV
CPMNRYSAQKQFWNAKQGKQGNTTEGALLKKLQHAAELEQKQNESENKKLLGDMVKYSNV
IQLLHIKSNKYLTVNKRLPALLEKNAMRVSLDMAGNEGSWFYIQPFWKLRSEGDNVVVGD
KVVLMPVNAGQPLHASNIELLDNPGCKEVNALNCNTSWKVTLFMKFSDYRDDVLKGGDVV
RLFHAEQEKFLTCDDYKKHQHIFLRTTLRQSATSATSSKALWEIEVVHYDPCRGGAGQWN
SLFRFKHLASGNYLAAEVNPDFRDEDTDGKAAVEGDILSSKKKRQAAERIAYTLVSVPHG
NDIASLFELDATTLQRADCLVPRNSYVRLRHLCTNTWVTSTSIPIDVEEERPVMLKIGTC
PTKEDKEAFAIVSVPLSEVRDLDFANDASKVLASTVNKLENGNIAQNERRFVTKLLEDLI
FFVADGSNNGQEVLDVVITKPNRERQKLMREQNILEQIFGILKAPFKDKEGEGPMLKLEE
LGDQRYAPFKYILRLCYRVLRHSQQDYRKNQEYIAKKFCIMQSQIGYDILAEDTITALLH
NNRKLLEKHITAKEIETFISLLRRNREPRFLDYLSDLCVSNTTAIPVTQELICKFMLNPI
NADILIQTKLIPHMDNALESSLLQDDVDDEEVWLYWIDSHKEPHGKSIRHLAQDAKEGNK
VDKDIITYYRYQLNLFAKMCLDRQYLAINQISTQLQVDLILRCMSDECLPFDLRASFCRL
MLHMHVDRDPQESVIPVRYARLWMEIPSKITIHDYESSTDTSRDDMKSKFAQTMAFVEDY
LKDVVSQPFPFGDQEKNELTFEVVHLARNLVYFGFYSFSELLRLTRTLLAILDIVQHPVS
SYMDRLSTFSDGGNNVLKTIHGVGEMMTQMVLSRGSFLPVVHDSQPTARHGKQVSLADSE
DVMVMDTKLKIIEILQFILSVRLDYRITYLLSIYKKEFGDSNLHDSTISLSGLPSITITE
PDIDAIAAHAETMFAGCKERSAVELDDEGGRTFLRVLIHLIMHDYPPLVSGSLQLLFKHF
SQRAEVLQAFKQVQLLVSEQDVENYKQIKTDLDQLRLTVEKSELWVEKSINYGSEEMGEG
QAKEQIHEDPGILSPVQDGSKKPQIDSNKSNNYNIVKEILIRLSKYYHQSKKSRIQQQRL
LKNMGAHTVVLDLLQIPFEKSDEKMNEIMNLAHVFLQNFCRGNPQNQALLHKHLNLFLTP
GLLEAETMRHIFMNNYHLCNDISERVVHHFVHCIETHGRHVQYLRFLQTIVKADGKYVKK
CQDKVMTELVSGGEDVLVFYNDRTSFPILLQMMCSERDRTDENGALAYHITLVALLAACT
EGKNVYTEIKCNSLLPLDDIVRVVTHDDCIPEVKTAYVNFVDHCYVDTEVEMKEIYTSNH
IWKLFENFLVDMARVCNTTTDRKHADLALEKYVTETVVAIVKGFFSSPFSVNSSNLQTHQ
PIFIQLLQSAFRIYNCTWPNALQKANVEGCIKTLAEVAKNRAIAIPVDLDSHVNTLFLKN
HTNMVQRAATGWRMSARSGPRKEPLGGPDYKNIIEKLQGVVASLEEQFSPMVQAEFSVLV
DVMHSPELLFPEAARIRCESGAFMSKLITHTKKLMDKEEKLCIKILQTLREMLDKKESFE
EQGNVLRRILLTRYFGSARSFTKADFGNAINSSLSSGSLSKSSLGGGSSGQDSDKTGTCL
ADIQCLLDSEGASELVVDLIVSTKNDRIFQESILLGIALLKGGNTQIQNSFYHQLSKQKK
SEKFFKVFYDRMKMAQQEIRSTMSMNTYDLSCKKKDDDGDMTTSRTKKIGKGSPLHLKYE
IKGQLKEASAATSKAYCLYRKELDPEIDLIGSGTEGGADDSSPEEMQMSPAIAIMEPILR
YLQLLCENHNRDLQNFLRHQNNKTNYNLVCETLQFLDCICGSTTGGLGLLGLYINERNVN
LVKQTLESITEYCQGPCHENQTCIAQHESNGIDIIIALVLNDINPLGKYRIDLVLELKNN
ASKLLLAIMESRHDSENAEKILYNMRPHELVDVMKDAYNQALENETDEESGGDQILPKDV
GHNIYILAHQLARHNKLLQQSLKTAPDPDLEGDEALKHYANHTAQIEIVRHDRTMEQIVF
PVPNICEYLTEESKIRVFNTTERDDQGSKVNDFFQQFEDLYNEMKWQKKIRNNPALFWFS
RHISLWGSISFNLAVLVNLAVALFYPFGDDGDEGTLPPLISALLWAAVTVCTAMLFVLPK
PGGIRPFLLSVMLRSIYTLGLGPALILLGAANLCNKIVFLVSFVGNRGTFTRGYKAVIMD
MAFLYHVTYVIVCMLGLFVHEFFYSFLLFDLVYREETLLNVIKSVTRNGRSIILTAVLAL
ILVYLFSIIGFLFLKDDFRMDVDRLSTAETEADGTERVCDTLLMCIITVLNQGLRNGGGV
GDVLRKPSKNEPLFAARVVYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEKQRKEEILKT
TCFICGLERDKFDNKTVSFEEHIKSEHNMWHYLYFLVLVKVKDPTEYTGPESYVAQMIKE
KNLDWFPRMCAMSLVSNEGDSEQNEIRMLQEKLDSTETLVTQLSSQLSELKEQMTEQRKN
KQRLGFLGSNTPHVNHHMSSH
NT seq
7986 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccgaggtccagttttcttcacattggggatattgtctccctgtacgctgaa
ggaacagtcaatggcttcattagcactttgggattagtggatgacagatgtgtagtacag
ccagatgctggggatcttgccaatccaccaaagaagttccgagactgccttttcaaagta
tgtcctatgaacagatattcagcacagaagcaattctggaacgcaaaacaaggaaaacag
gggaacaccacagagggagcactgctgaagaaactacagcatgctgccgaactggaacag
aaacaaaatgaatcggagaataaaaaattgcttggtgatatggttaaatacagcaatgtc
atacagctactacacatcaaaagcaacaagtacctcaccgtgaataagagacttccagcc
cttcttgaaaagaatgctatgcgagtgtcgctggatatggctgggaacgagggctcctgg
ttctatatccagcccttctggaagctgcggagtgaaggtgacaatgttgttgttggtgat
aaggtggtgctgatgcctgtgaatgctggacagcctcttcatgccagtaatatagagctt
ctagacaacccaggctgcaaggaggtgaatgcactgaattgtaacacaagctggaaagtc
accctttttatgaaatttagtgactacagagatgatgttttaaaagggggtgatgtggtg
aggttattccatgcagagcaagaaaagttcctgacctgtgatgattacaagaagcatcaa
cacattttcctcaggaccacactgcgacaatctgccacctccgccaccagctccaaagca
ctctgggaaatagaggttgtgcactatgacccctgcagaggaggagctgggcaatggaac
agccttttccgattcaaacacctggcttcaggaaattatttggctgcagaggtgaaccct
gattttcgagacgaggacacggatggtaaagctgcggtggaaggagatatcctgtcctca
aagaagaagcgccaggcggccgagaggattgcctacaccctggtctctgtcccacatggg
aatgacattgcctctctctttgaactggatgccaccactctacagagggcagactgcctc
gtcccaaggaactcatatgtgagactgagacacctttgcacaaacacctgggtaaccagc
acaagtatccctatagatgttgaagaagagagacctgtcatgcttaagattggaacatgc
cccacaaaagaagacaaggaagcctttgctatagtctcagtcccgttgtcagaggtcaga
gacctggactttgccaatgatgctagcaaggtcctagcatcaacagtgaataagctggag
aatgggaacatcgctcagaatgagaggaggtttgtaactaaactgttggaagacctcatt
ttctttgtggctgatggttccaacaatggtcaggaagtgttggatgtggtcattactaaa
cccaaccgggagagacagaagctcatgagggaacaaaacattttggagcagatctttggt
atactaaaagcccccttcaaagataaagagggtgaggggccgatgctaaagctggaagag
cttggagatcagcgatatgctccatttaagtacatactcaggctgtgctacagagtcctt
agacattcacagcaagattataggaaaaaccaggaatatattgccaagaagttttgcatc
atgcagtctcagattggatatgacattttagcagaagacactatcactgccttgctccac
aacaaccgaaaactgctggagaagcacatcacagccaaggaaatcgagacctttatcagt
ctgttacggagaaatagagagcccaggttcttggattatttgtcagacctctgcgtgtca
aacacaactgcaatcccagtgactcaagagcttatttgtaaatttatgctaaaccccatc
aatgctgatattctcattcaaacaaagctgataccacacatggataatgccctggaaagc
tccctgctgcaggacgatgttgacgatgaagaggtgtggctctactggatagacagccat
aaggaaccccatgggaagtcaatccggcatttggcacaggatgccaaggaaggcaataaa
gtggacaaagatatcattacatattacagataccagttaaacctgtttgctaagatgtgt
ttggatcggcagtacctagccatcaaccagatctccacccagctgcaggtagacctgatc
ctgcgctgcatgtctgacgagtgcctgccctttgacttgagggcctccttctgccgcctg
atgctgcacatgcacgtggacagggacccacaggagtctgtcatcccggtcagatacgcc
aggctgtggatggaaattccaagcaagataacaatccacgattatgagtcctccacagat
acctccagagatgacatgaagagcaagtttgcccaaacaatggcatttgttgaggattac
ctgaaagatgttgtatctcagcctttcccatttggtgaccaagaaaaaaatgaactcaca
tttgaggtggtgcacttggcacgtaatctggtctactttggattttatagttttagtgag
ctgctgaggttgaccaggacattattagcaattctagacattgtgcaacatcccgtgtcg
tcatatatggatagattaagcacattttctgatggagggaacaatgtactgaagacgatt
cacggtgtgggagagatgatgactcagatggtgctgagccgaggatcgttcctgcctgtt
gtgcatgactctcagcccactgctcgccacggaaagcaggtcagccttgctgacagcgag
gacgtcatggtaatggataccaaactgaaaatcattgagatactgcaatttattctcagt
gtgcgactggactacaggatcacctaccttctgtctatctacaagaaggagtttggagat
agcaatttacatgacagtaccatatccctttcaggacttccctccataaccattacagag
cctgatatagatgcgattgcagcgcatgcagagaccatgtttgccggatgtaaagaaagg
agtgcagttgagctggatgacgagggtggacggacgtttctccgagtcctgattcatctg
ataatgcacgactaccctcctctggtgtccggttccctccagctgctgttcaaacacttc
agccaaagagcagaggtcctgcaggcctttaaacaggtccagcttctggtctctgaacag
gatgtagaaaactataaacaaatcaagacagacctggaccagttgaggctgacagtagaa
aaatctgagctgtgggttgaaaagagcatcaactatgggagcgaggaaatgggcgaagga
caagccaaggaacaaattcacgaggatccaggcatcctaagcccagtgcaagatggaagc
aaaaagccccagattgatagcaacaagagcaacaattacaacattgtcaaagagattttg
attcgattgagtaagtattatcatcaaagcaaaaagagtcggattcagcagcagaggctg
ttgaagaacatgggtgctcatacagtagttctggaccttttgcagatcccttttgaaaag
tctgatgagaagatgaatgaaattatgaacctggcccacgtattcctacagaacttctgc
cgtggaaaccctcagaaccaggccctgctccataaacacctcaacctcttcctcactcct
ggactgctggaggctgaaacgatgaggcacatctttatgaataattaccatctttgcaat
gacatcagcgagagggtggtacatcattttgtgcactgcatagagactcacggccggcat
gtgcagtatctccgctttttacaaaccattgtgaaggctgatggcaaatacgtgaagaaa
tgccaggacaaggtcatgactgagctggtcagtggaggagaagatgttctggttttctac
aacgaccggacttccttccccatcctgctgcagatgatgtgctctgagcgggaccgcaca
gatgagaacggggccctggcctaccacatcacccttgtagcgttgctggcagcctgcact
gaggggaagaatgtgtacacagagatcaagtgcaactccctgctccctctggatgacatt
gtcagagttgtaacccatgatgactgtattcctgaggtgaaaactgcctatgtcaatttt
gttgaccactgttatgtagacacagaggttgagatgaaggagatatatactagtaatcac
atctggaaactttttgagaacttccttgttgacatggctcgggtttgcaacaccacgact
gacagaaaacatgcagatctagccctggagaaatacgtcacagagactgtggtggcgatc
gtcaaaggtttcttcagctctccattttcagttaacagctcaaatttacagactcatcag
ccaatatttattcagctactgcagtctgcttttaggatttacaactgcacatggccaaat
gcattacagaaagccaatgtagaaggctgtattaaaactttggctgaagttgcaaagaac
cgtgccatagccattccagtagatctggacagccatgtgaacactctctttttgaagaac
cacaccaacatggtgcagagggcagccacgggctggaggatgtcggctcgcagtgggcca
cgcaaggagcctcttggtggaccagattacaagaacataattgagaagctacagggtgtt
gtagcatctctggaggagcagttcagtccgatggtacaggctgaattctctgtgctggtt
gatgtgatgcacagtccagagcttttgtttccagaggctgcaagaatacgttgtgaaagt
ggagccttcatgtccaagctgattacacataccaagaaactgatggataaggaagagaag
ctgtgcattaaaatactccaaacgttacgagaaatgctagacaaaaaggagagcttcgag
gaacagggaaacgtgttaagaagaattctcctcacccgctactttggtagtgcccgcagt
ttcacaaaagcagattttggaaatgccattaacagctcactgtcttcaggaagtttgtcc
aaatcttctctggggggtggatcttctgggcaagactcagacaaaactggtacctgcttg
gcagatattcagtgcctcctagacagtgaaggggcttctgaactggttgtagatctcatt
gtgagcactaaaaatgacaggatcttccaggaaagcattttgctgggaattgctttgttg
aaaggaggaaatacccaaatacagaattcattttaccatcaactgagtaaacagaagaaa
tctgaaaaattcttcaaagtcttttatgatcggatgaagatggcgcagcaggagatccga
tcaacaatgtcgatgaacacctacgatctgagctgcaagaagaaggacgatgatggagac
atgacaacctccaggacaaagaaaataggcaagggttcacctcttcacctcaaatatgaa
attaaaggacagttgaaagaagcctctgccgccacctctaaggcgtactgcctgtatcgg
aaagagcttgaccctgagattgatctgattggctcagggactgagggaggagctgatgac
agctctccagaagaaatgcaaatgagccccgccatagcgataatggaacccatcttgcgg
taccttcagctgctctgtgagaaccacaaccgggatctgcagaactttctcagacaccaa
aacaacaaaaccaactataacctggtgtgcgagacgcttcagtttctggactgtatctgt
gggagtacgacgggagggctgggtctccttggactctacatcaatgaaaggaatgtcaat
ctggtcaaacagacactggagagcataacagagtattgccaggggccctgtcatgaaaac
cagacctgcatagcacaacacgaatccaatgggattgatatcataattgcactcgtattg
aatgacatcaaccctcttggcaagtatcgcattgacctggtgctggagttaaagaacaat
gcctccaagcttttgctggcaataatggaaagcagacatgacagtgaaaatgcagaaaag
atcctgtataacatgagaccacatgagctggtggatgtgatgaaagatgcatacaatcaa
gcactggaaaacgaaacagatgaggaaagcggaggtgaccagatccttccaaaagatgtt
ggccataatatttatatattggcccatcagctggcccgccacaataagttgctacagcag
agtttgaagactgcacctgatccagatttggagggggatgaagccttgaaacactatgct
aatcacacagcacaaattgagattgtacgccatgaccgaactatggagcaaatcgtattc
ccggtgccaaatatttgtgaatacctgacggaagaatcaaagatccgtgtgttcaataca
acagaaagagacgaccaaggcagcaaagtgaatgacttttttcagcagtttgaggatctc
tacaatgaaatgaaatggcagaaaaagatcagaaacaatccagctctgttttggttttcc
cggcacatctcattatggggaagcatttcattcaatttggcagttttggtaaacctggca
gttgcactattttatccttttggggatgatggggatgaaggcactctccctcctctgatc
tcggctctgctctgggcagcagtcacagtctgcacagctatgctttttgtgttaccgaaa
ccaggggggattcggccattcctcttatctgttatgctcaggtctatatatacactagga
cttggccctgcgttaatactgcttggcgctgctaatctttgtaataagatagtgtttttg
gtgagcttcgttggtaaccgtggaacattcacacgtggatataaggctgttatcatggat
atggcgtttttgtatcatgttacctacgtcattgtttgtatgctgggcctttttgtccat
gaattcttctacagctttttgctctttgatctggtgtacagagaggagactctgctgaat
gtaatcaagagcgtcaccaggaatggacgttccatcatcctcacagctgtgctggccctg
atcctcgtatacctcttctccatcattggcttcctcttcctcaaggatgacttccgcatg
gatgtagacaggctgtccacagcagaaacagaggccgacgggacggagagagtctgcgac
actttgctgatgtgtatcatcacagtattaaaccagggcctgaggaacggtgggggagta
ggagatgtgttgaggaagccttcaaaaaacgagcctctctttgctgcccgggttgtgtat
gacctcttgttcttcttcattgtaatcattattgttctcaatctaatctttggtgtaatc
attgacacctttgctgatctgaggagtgagaagcaaaggaaagaagaaatactgaagacc
acatgcttcatctgtggtcttgagagagacaagtttgacaacaagactgtttcttttgag
gagcacatcaagtccgaacataatatgtggcattacctgtacttcctagtgcttgttaaa
gtaaaagacccaaccgaatacacaggacctgaaagttacgtagcacagatgataaaggag
aaaaacttggactggttccctcgaatgtgtgccatgtcccttgttagtaatgaaggtgac
agtgaacagaacgagatccgaatgctgcaggagaagctggacagcacagagacgctggtc
acacagctgtccagtcagctttctgaactcaaagaacagatgactgaacaaaggaagaac
aagcagaggttaggctttcttggatcaaacacacctcatgtgaatcatcacatgtcatca
cactaa
DBGET
integrated database retrieval system
