Polyodon spathula (Mississippi paddlefish): 121318395
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Entry
121318395 CDS
T07273
Name
(RefSeq) early endosome antigen 1-like isoform X1
KO
K12478
early endosome antigen 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121318395
04145 Phagosome
121318395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121318395
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121318395
Protein recycling
Other Rab GTPase associated proteins
121318395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FYVE
CCDC39
Rod_CreS
zf-C2H2_ZNF462_11
ATG14
CCDC171
IBR
CRWN_N
ADIP
FYVE_CARP1-2
zf-Di19
Motif
Other DBs
NCBI-GeneID:
121318395
NCBI-ProteinID:
XP_041110935
LinkDB
All DBs
Position
7:complement(24325198..24355055)
Genome browser
AA seq
1444 aa
AA seq
DB search
MFRRILQLTPGKGSSQSSDSDQPAAAEVNHEESSEGFICPLCMCSYKTSTDLFDHYQSEH
GEAGTKPQEQRNPLPVTGFICPQCMKAHASAEELFKHYEAFHESSGQSVHRGSDNQSPGR
DNLTFLQQEVQDLQASLKEERWFSVELKKELEKVQGQLKQGPQTGGNTDGSTEVQSIGLK
LQEAETEKFNIKQMKDLFEQKAAQLATEIVDIKSKYDEEKSLREAGEQRMRSLLQDLQKE
RTEKENLSIELLQRPGVEDVEVLKKELIQVQTVMDQMTRESEEKSERLKNQYKQLQADFT
TSEKTISQLRAELAKGPQEVAVYTKELQKLQSSLNVLEQQNQSFSEKLSKKEKEYEELEK
HLNEEVTSKKGLQASLQQKELDCQQLQTQASSIETSFQRVQSELREREEASQKLKGELSE
VEVRHQQLKAEFKQVQQQREEKEQQGLQQQSEINQLHSKLLETERQLGEVQGRLKEQRQL
SGEKLKDKEQQVADLQLKLSRAEEQIKENAVNSTELQHQLDKARQQHQELQGVQQNTTSK
LREAQNDLEQVLRQIGDKDQKIQNLEALLQKSKDSITQLETERDDLCAKIQAGEGETAVL
NQLQEKNHALQEQVTQLTDKLKNQSESHKQAQDNLHEQVQEQKTHLRGAQDRCLSLETTI
SELNGQIAESKEKVTQLDSQLKAKTELLLSAEAAKAAQRADLQNHLETAQHALQDKQQEL
TKIKAQLDQVSTKLEDKKEHCSQLESNLKENKEKLLNSEQKIEQLEGQVKKHEADLQEVQ
TNRDQLQQDLEKRKKQSSETENQVKELCKQLDAEKGVVTTIKEVLQKKSTALEEAKQQLT
KQEEDKVNIKQDLEKLRQEAKTRQEELGNKAQALTENLQKTQQEKESLLKDLAVMKENLS
KVSQSLKELQMQLEKQKQNEKEALDQKEKSHQKVNRELQKKAESAAKEVNEVKSLLQKKD
ETEKELKSQLASVTTQLLKVQEGLKEKEKAEQQLQRKLKGAQESSTQEIKKLESQLTDLQ
TVHLQKVQVEVKLKEQLSQELNDEKEKLTQLQKCYDSIKESQSKLQTELHGKESELSAIR
QDLKITEEKQTLAEEELVTNRNQLASQSQLIQELKAAKAELEQDVVKKNEQIKRQENTLQ
DEQKQKTLKEEELKKEKSKAAELNKLKSELEKKASELTEEHRALKEQYEKELTDLKDAKQ
LLIQQKLDTQGVADNFRSALEQEKKEHKTTREAFGKREEELKKEQTQRESKLNTELKAKE
EQRKRYEEAEAKMSMEITALNENIGTLKKEWQSSQQRVGELEKQTDDLRGEIAVLEATLQ
NNQDERRALLERCLKGEGEMEKQQTKMMEMRRKLDDTTAAMQELGRENQMLQIKNTQALT
RKWAEDNEVQNCMGCGKGFSVTVRKHHCRHCGNIFCGECSARNALTPSSKKPVRVCSTCF
DELQ
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgttcagacggattttgcagctgacaccagggaaaggcagctcccagagctcagactct
gatcagcctgcagctgctgaagtaaatcatgaagaatcctctgaggggttcatctgccct
ctctgtatgtgttcttacaaaacgtctactgacctgtttgaccattaccagagtgagcat
ggggaggcaggcacaaagccacaggagcagcgaaatccactacctgttaccggttttatt
tgtccccagtgtatgaaggctcatgcctctgcagaagagctattcaagcactatgaagca
tttcatgaatccagcggtcagtcggttcacagagggtcagacaaccagtccccaggaagg
gataatttaacattccttcagcaagaagtgcaagatctacaagcctcacttaaggaggag
cgctggttttcagtggagctgaaaaaagagctggaaaaagtacaagggcagctgaagcaa
ggtcctcagactggtgggaacactgacggatcaacagaagtgcagtctataggactcaag
ctgcaagaagctgaaacggaaaagttcaacatcaagcagatgaaggatttgtttgagcag
aaagctgcacagctggcaactgagatagtagatataaagtctaagtatgatgaggagaag
agtctgcgagaggctggagagcaaagaatgaggagcctactgcaggatcttcagaaagag
agaacagagaaagagaacctcagtattgagctgcttcagcggcctggtgtggaagatgtt
gaggttctgaagaaggagctgatccaggtccagactgtgatggaccagatgacccgggag
agcgaggagaaatctgagaggctcaagaatcagtacaagcagctgcaggctgattttaca
acctctgagaaaacaatatcccaattacgagccgagctggcaaaaggtcctcaggaagtt
gcagtttataccaaggagctgcagaaactccagagctctctgaatgtactggagcagcaa
aaccagagtttctcagaaaagctgtcaaagaaggagaaagagtatgaggaattggagaag
catctgaatgaagaggtgacgagtaagaagggcttacaggccagcctacagcagaaggag
ctagactgccagcagttgcagacgcaggcctcgtcgatcgagacctcctttcagagagtg
cagtctgagctgagggagagggaggaggccagtcagaagctgaagggagagctctctgag
gtggaggtcaggcaccagcaactaaaagcagagttcaaacaggtccagcagcagagagag
gagaaggagcagcaaggcctgcagcagcagagtgagatcaaccagctgcactctaaactg
ctggagacggagcggcagcttggggaggttcagggccgtctgaaggagcagagacagctc
tctggagagaagctgaaggacaaggagcagcaggtagccgacctgcagctcaaactctcc
cgcgcagaagagcagataaaggaaaatgcagtaaactcaactgaattgcagcatcagttg
gacaaagcaagacaacaacatcaggagctgcagggtgtgcaacaaaacaccacctccaaa
ctacgagaggcacagaatgatttggaacaagtattgcgtcaaattggggataaagaccag
aagatccagaacctggaagctctgctacagaagagcaaggacagcatcacccagctggaa
acagagcgggatgatctgtgtgcaaaaatccaagcaggggagggggagacagccgtgctc
aaccagctgcaggagaaaaaccacgctctgcaggagcaggttacccaattgacagacaag
cttaagaatcagtcagagagccacaagcaggcccaggacaaccttcatgagcaggtccag
gagcagaagacccacttaaggggagcccaggatcgctgtctctccctggagaccaccatc
agtgagctcaatggacaaatcgctgagagcaaggagaaagtgacccaactagattctcag
ttgaaggcgaagactgaattactgctttcggctgaagctgccaaagctgcccagcgagcc
gatttgcagaaccacttagagacagcccagcatgcactgcaggacaagcagcaggagcta
accaaaatcaaggctcagttggaccaagtcagcaccaagcttgaggataaaaaagagcat
tgcagtcaactggagagcaacctgaaggagaacaaggagaagctgctgaactcagagcag
aagattgagcaacttgaaggacaggttaagaaacacgaggctgacctccaagaagttcaa
acgaacagagatcagcttcaacaggaccttgagaaacggaagaagcagagttcagaaaca
gaaaaccaagtgaaggaactctgcaagcagcttgatgcagaaaagggagttgtaactact
atcaaagaggtactgcaaaagaagtccactgctcttgaagaagcaaagcaacagctgacc
aagcaggaggaagacaaggtcaacataaagcaagacctggagaagctgaggcaggaggca
aagacgcggcaggaggaactgggcaacaaagctcaagccttgacagaaaatcttcagaaa
actcagcaggagaaagagtctctattgaaagacctagcagtaatgaaagagaacctgtcc
aaagtctcacagtctctgaaggagttgcagatgcagctggaaaagcagaagcagaatgaa
aaggaagccttagatcaaaaggaaaaatctcatcagaaagtgaatcgggagcttcagaag
aaagcagagtctgcagctaaagaagtaaacgaggttaaaagtctgctgcagaaaaaggat
gagactgagaaagagttgaaatcccagctggcatcagtaaccactcagcttttaaaagtg
caggagggactgaaggagaaggagaaagcagagcagcagctgcagcgaaagttaaaagga
gcccaagagtcctctacccaagagataaaaaaactggagtcgcagttaactgatttacag
actgttcatttgcagaaggttcaggtggaggtgaaattaaaagagcagttatcacaagag
ttaaacgatgagaaagaaaagttaacccaacttcagaaatgctatgacagcataaaggaa
agtcaatctaaactacaaactgaattgcatgggaaagaatcggagctttctgcaattagg
caggacctaaagattacagaggagaagcagacgttggctgaggaagaattagttacaaac
agaaaccaacttgccagccagagtcagttgatccaagagttgaaagcagccaaggctgag
ctggagcaggatgtggtaaagaagaacgagcagatcaaacggcaggagaatactttacag
gatgaacaaaaacaaaagacgttaaaggaagaggaattgaaaaaggagaagtcgaaggca
gcagagctgaacaaattgaagtctgaactggagaagaaagcgagcgagctgactgaggaa
catagggcgctcaaagaacagtatgagaaagagctgacagacctgaaggatgccaaacag
ttgctgattcagcagaagttggatacacagggggtggctgacaactttagatctgccttg
gagcaggagaagaaagaacacaagacaaccagggaggccttcggtaaaagagaggaagaa
ctgaagaaggagcagacacagagagagtccaaactgaacacagagctgaaggctaaagag
gagcagaggaagcggtatgaggaggcagaggccaagatgagcatggagatcacagcgctg
aacgagaacatcggcactctgaagaaggagtggcagagcagtcagcagcgggtgggggag
ctggagaagcagacagatgacctgcgaggggagatcgcagtgctcgaggccacgctgcag
aacaaccaggatgagaggagggcactgctggagaggtgtctgaagggtgaaggggaaatg
gaaaaacaacaaaccaaaatgatggaaatgagaaggaaactggacgatacaactgcagca
atgcaagagctgggcagggagaatcaaatgctacagatcaaaaatacccaagcactaacc
cggaaatgggctgaagataatgaggttcagaattgtatgggatgtggaaaagggttttcg
gtcactgtacgaaagcatcactgtagacactgtggaaatatcttttgcggtgaatgttca
gccaggaatgccttaaccccatcgtccaagaagcctgtgcgagtctgcagcacctgcttc
gatgagctgcagtga
DBGET
integrated database retrieval system
