Polyodon spathula (Mississippi paddlefish): 121318405
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Entry
121318405 CDS
T07273
Name
(RefSeq) transcription factor RFX4-like isoform X1
KO
K09174
regulatory factor X 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121318405
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Other basic domains
RF-X
121318405
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
Rop-like
Motif
Other DBs
NCBI-GeneID:
121318405
NCBI-ProteinID:
XP_041110955
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All DBs
Position
7:complement(24802701..24831821)
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AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLSESESKRYSSHTSLGNMSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPE
FPNVKDLNLPVSLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVSIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFARQLDEWLKMALHD
LPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITK
QTLYTMEDSREEHRKLIIQLYQEFDHLLEEQSPIESYIEWLDSMVDSCVVKVSGKIPGSL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYVLESLHCQERANEL
MRAMKAEGSTADTGEEIMLTEPTPPSPSPGPYSPAKSVTSAEITSAPSPGNSHSPEYTIV
TTTSVGAVQSYTWSLTYTVTTAGNNPSDAGQQLPCMRSSQLPPSSSTHRMPVYPHREEHG
YTGGYNYGSYSNQHHHPIQSQYAALPHEPGITAPLHYPAYHRSTSQYPLNSQMTRMEPCL
MSGTARLHPTPVTPRWPDVPSANNCYTSPPMHSSRYVNASDMYTPLAPRRNSEYEHVQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggttattggaagaacctgacatggattctacagagagctggattgagaga
tgtctcagcgaaagcgaaagtaaacgatactcaagtcacacatcactgggcaatatgtct
aatgatgaaaatgaggaaaaagaaaacaacagagcttccaaaccacactcaacaccagct
actttacaatggctggaagaaaattatgaaattgcagagggggtatgtatcccacgaagt
gctttgtacatgcattacctggacttctgcgagaagaatgacacacagcctgtcaatgct
gcaagctttggaaagataattagacagcagtttccacagttaactacaagaagactaggc
acaagaggccagtcaaagtaccattactatggaattgcagtgaaggagagctcccagtat
tacgatgtgatgtactccaagaaaggggcggcctgggtaaacgagacaggaaagaaggag
gtcaccaagcagacagtggcatattcaccacgctccaaactggggacgctactgccagag
tttccaaatgtcaaagatctaaatctgccagtgagtctgccagaggagaaggtttctacg
tttattatgatgtacagaactcattgtcagaggattctggatacagtaataagagcaaat
ttcgatgaggtacaaagttttcttttgcacttttggcaaggcatgccacctcacatgctt
ccagttcttggttcctctacagtcgtcagtatagttggtgtttgtgattctatactctac
aaagcgatttccggagtcctcatgccaaccgtcttgcaggcattaccagacagcttgact
caggtgatacggaagtttgccaggcagctggatgagtggttaaagatggctctgcatgat
cttccagaaaacttacgaaacatcaagtttgaattgtcaagaagattttctcaaattctt
agaaggcaaacatctttaaaccacctctgccaggcctccagaacagtaatccatagtgcg
gacataacattccaaatgttggaggactggagaaatgtggatctgaatagcattaccaag
cagactctgtatacaatggaggattcaagggaggaacacagaaaacttattatacaattg
tatcaggaatttgaccatcttttggaagagcagtcacccattgaatcctacatagaatgg
ttggattccatggtggacagctgcgttgtcaaggtatctggaaaaatacctggctcccta
aagaaagttgcccagcagttccttttaatgtggtcctgctttggaacaagagtcatcagg
gatatgactttgcacagcgctcctagctttggttcctttcaccttatccacttaatgttc
gatgactatgttctttatgtgttggagtctctccattgtcaggaaagagcgaacgaactt
atgagagcgatgaaggcagaaggaagcacagcagacacaggggaagaaataatgttaaca
gaaccaacccctccttctccttcaccgggaccctactctcctgctaaatctgtcacatct
gcagaaatcacctcggctccatctcctgggaacagtcactccccagaatatacaatcgtg
acaactacatcagtaggtgctgttcaatcatatacatggtcccttacgtatacagtgaca
acagcaggaaataacccatctgatgccggccagcagctaccctgtatgagaagcagtcag
ttacctccatcttctagcacacacaggatgccagtctacccacacagggaagaacacggg
tatacaggtggatacaactatggaagctacagcaaccagcaccaccatccaatccagagc
cagtacgcagctcttccacatgaacctggcatcacagcacctctgcactacccagcatac
cacaggagcacctcacagtaccccctcaatagtcagatgactcggatggagccttgccta
atgagtggtaccgcaagactgcaccccacacctgtgaccccacggtggcctgacgtccca
tcagcaaacaactgctacaccagcccgccaatgcactcctctagatatgtcaacgccagt
gatatgtacacgcccctggcaccccgcaggaactctgaatacgaacatgtgcaacacttc
ccgggctttgcttacataaatggggaggccacgacaggatgggcaaaataa
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