Polyodon spathula (Mississippi paddlefish): 121318422
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Entry
121318422 CDS
T07273
Name
(RefSeq) anoctamin-4 isoform X1
KO
K19499
anoctamin-4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121318422
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121318422
Ion channels [BR:
pspa04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
121318422
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Gene cluster
GFIT
Motif
Pfam:
Anoctamin
Anoct_dimer
Motif
Other DBs
NCBI-GeneID:
121318422
NCBI-ProteinID:
XP_041110998
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Position
7:25480669..25549367
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AA seq
917 aa
AA seq
DB search
MEESSSGSPDSAVTNGKVSHPAIRDVNIFFDGSEGVNNPSKDDDSLLHPGNLTSTSEDRS
RLETEKDGVKETSKLSGLFFRDGKCRIDYIVVYRKSSPQTEKREVFERNIRAEGLQMEKE
SSITNSDIIFLKLHAPWEVLCRYAELMNIRMPFRRKIYYLHRRFKFMSRMEKRISRFRGW
LPRKPMKFDKETLPDLEENDSYTAPFSQQRIHHFIIHNKDTFFNNATRSRIVHHILQRIK
YEEGKNKIGLNRLLSNNSYEAAFPLHEGSYRSKNSIRTHGADNHRHLLYECWAWWGVWYK
YQPLDLVRQYFGEKIGLYFAWLGWYTGMLFPAAFVGLIVFLYGVFTLDYCQVSKEVCQAS
DIIMCPLCDKYCPYMKLSDSCVYAKVTHLFDNGATVFFAVFMAVWATVFLEFWKRRRAVI
AYDWDLIDWEEEEEEIRPQFEAKYSKKERVNPISGKPEPYQAFTDKCSRLIVSASGIFFM
ILVVIAAVFGIVIYRVVTVSTFAAFEWALIRKNSQVATTGTAVCINFCIIMLLNVLYEKV
ALILTNLEQPRTESEWENSFTLKMFLFQFVNLNSSTFYIAFFLGRFTGRPGAYLRLINRW
KLEECHPSGCLIDLCMQMGIIMVLKQTWNNFMELGYPLIQNWWTRRRLRQEHGHEAKASF
PQWEKDFNLQPMNDYGLFDEYLEMILQFGFTTIFVAAFPLAPLLALLNNIIEIRLDAYKF
VTQWRRPLASRAKDIGIWYGILEGIGILSVITNAFVIAVTSDFIPRLVYAYKYGPCAGQG
QAGEKCMVGYVNASLSVFQVSDFENRSEPKTDGSIKYCRYRDYRDPPNSKEPYSYTLQFW
HVLAARLAFIIVFEHMVFTIKNLISYLIPDLPKDLRDRMRREKYLIQEMMYEAELDRLQK
ERNERKKNGKSHHNEWP
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtcgtcctctggatccccagactcagcagtcactaatggaaaagtatctcac
ccagcaattagagacgtcaatattttctttgacgggtctgagggtgtcaacaacccgtcc
aaggacgatgactctctccttcacccgggcaacctgacaagtacctctgaggacagaagc
cgattggaaacagaaaaagatggtgtgaaagaaacaagtaaattgagtggactgtttttc
agggatgggaagtgtcggattgattatattgttgtttacagaaagtccagtccacaaaca
gaaaaaagagaggtctttgaaagaaatatcagagcagaaggactacagatggaaaaagag
tcctctataacaaacagcgacatcatttttctgaagttgcatgccccttgggaagttctt
tgcagatatgcagaactaatgaacatacgtatgcctttcaggagaaaaatctattacctg
caccggcgcttcaagttcatgagcaggatggagaaacgaataagcaggtttcgaggatgg
ctgcctcgaaaaccaatgaagtttgacaaggagactttaccagacctggaggagaatgac
agctacactgcccccttcagtcagcagaggatacaccactttattatacacaacaaagat
actttctttaataatgccacaagaagccgaattgtccatcatattctgcagaggatcaaa
tatgaagaaggaaagaataaaattggacttaaccgtctgctgagcaataattcctatgaa
gcagcctttccacttcatgagggaagttacaggagtaagaactcaataaggacccacgga
gcagacaaccacagacacctgctgtatgagtgctgggcctggtggggagtctggtataaa
taccaacctctggatcttgtacggcaatattttggtgagaagatcggtctgtactttgcc
tggcttggctggtacactggaatgctttttccagctgcctttgtgggactgatagtattt
ctgtatggagtcttcaccctggattattgtcaagtcagtaaagaagtctgccaagcaagc
gatattataatgtgtcctttgtgtgataagtactgtccctacatgaaactgtcagacagc
tgtgtctatgccaaggttacacatctttttgacaacggagcaactgtcttttttgctgtt
ttcatggcagtatgggcgacagtcttcttggagttctggaaaagaaggcgtgcagtgatt
gcctatgactgggacctgattgactgggaggaggaagaggaagagatccgcccacagttt
gaagccaaatactcaaagaaggagagagtgaatcccatatctgggaagccagagccttat
caagcttttacagacaaatgcagccggctgatcgtgtcagcatctgggatattcttcatg
atcttagtggtgattgctgctgtttttggcattgttatctaccgtgtggtgactgtgagc
acttttgctgcctttgaatgggctttaatcaggaaaaactctcaggttgcaactacagga
acagcagtctgcatcaacttctgtattatcatgttactgaatgtgttatatgaaaaagtt
gccctcatacttacaaatttagaacagcctcgtacagagtctgagtgggagaacagcttt
acactgaaaatgtttctgtttcagtttgtcaatctgaacagctctacgttttatattgcc
ttcttcttaggaagattcacagggcgccctggtgcctacctgaggctcataaacagatgg
aagctagaagagtgtcacccgagtggatgccttatcgacctctgtatgcagatgggaatc
ataatggtactcaaacagacatggaataatttcatggagcttggctacccgttgattcag
aactggtggacacggaggaggctacgacaagaacatggccatgaagcaaaggcaagcttc
ccacagtgggaaaaagacttcaacctccagccaatgaatgattatggactgtttgacgaa
tatttagagatgattctgcagtttggcttcacaaccatatttgtggcagcttttcctctg
gcaccactcttagccttattgaacaacatcattgaaatccgacttgatgcttataaattt
gttacgcagtggagaagacccttagcctcaagagccaaagatataggtatctggtatggt
attctggaaggcattggaatcctctctgttatcacgaatgcatttgtaatagcagtgact
tcagacttcatcccccgacttgtctatgcatacaagtatgggccctgtgcagggcaaggg
caagctggagaaaagtgcatggtgggatacgtaaatgcaagcttgtcagtgttccaagtg
tcagattttgaaaaccgttccgagcccaaaacagatggatcaataaaatactgcagatac
agagattatagagaccctcctaattccaaagagccttacagctacacactacagttctgg
catgttctagcagcacggctagctttcatcattgtgtttgagcacatggtttttaccata
aaaaatctgatttcctacctgatcccagacctaccgaaagacctgagggatcgaatgcgg
agggaaaagtacctgattcaggaaatgatgtatgaggcagagctggatcgccttcagaaa
gaaaggaatgagaggaagaagaatggaaaatctcatcacaatgagtggccctaa
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