Polyodon spathula (Mississippi paddlefish): 121318426
Help
Entry
121318426 CDS
T07273
Symbol
mybpc1
Name
(RefSeq) myosin-binding protein C, slow-type isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121318426 (mybpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121318426 (mybpc1)
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121318426 (mybpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
THB
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
BiPBP_C
Ig_CYK3_C
Shr-like_HID
Motif
Other DBs
NCBI-GeneID:
121318426
NCBI-ProteinID:
XP_041111003
LinkDB
All DBs
Position
7:25680092..25725958
Genome browser
AA seq
1324 aa
AA seq
DB search
MPEPTKKSGSAFTKKPKSLQVCAGSTAEFTAETAKPEFKVKWQKDGKDIQASNKYIIKQD
QTLHTLIINDASKEDDVVYSVISGTSKVKFEMKIKGQDGKDEKPGSKPEAAENNESVPAS
SPSPEPVGELKDEAPVSAPEKKEDEIVTVITPPPAEDKEDDLATSSPSPQPPSDDTSDVQ
KHIEIPNDSLPESAKGRKDSVWSLGEAPPDDIDKPEDTPRSTLLIEKPQSGSVTVGGDIT
FIAKVEAKDLLRKPTIKWFKGKWMDLASKTGKHLQLKETFDRLTKVHTFEMSIIKAKDNY
AGNYRCEVTYKDKFDSCSFDLEVKEVPEVLPSIDIRSAFKRSGEGQDDAGELDFSGLLKH
RANREIKQEETVPEEDVWEILKNAPPQEFERIAFEYGITDLRGMLRRLKRMKREEKKSEA
FSKKLESAYQADKGGKIKFVVELADPTVELKWYKNGQEIRPTPNQKKYIFEHKGTQRILV
INNCTMADDAAYQVMAGDEKCSTELFVKELPVTIKKELEAVKTTVNERIELECEVSEEGA
NVKWFKNGVEIPREIRSRFRFKSDGMKHTLVIEDAKKEDTAVYSAMTTGGKSEAHVQVDL
KPLKILQDLTDQTVRLGKSLVLHCEINPANVPGRWYKNAQLIPGTDRVKITHRGSSHKLE
IENAGVDDMGDYTFVPEGYSVSLNGKVHVTDPPKIHLDSLNYPENTVTVQAGNKLRLDIP
VTGQPAPRVVWMKGERVILDTGSRVRAESFPDHSTFTIDVAEREDTGTYKIVLQNEAGED
SAQLKIKVVDIPDPPQAPIVTEVGGDWCSMIWETPLYDGGSPILGYFIERKKKQSSRWMR
LNFDVCKEKAFEPKKMIEGVPYEVRVFAVNAIGISKPSEPSKAFVPLAVTSEPSLLVVDE
VTDSTVTMKWRPPEHIGAAGLDGYVIEYCFEGKDEWIVSNQELTEKTKYTIHGLPSGEKI
FVRVKAINAAGASAPRMHPHPILVKEVIEQPKIRIPRHLHQTYIRRVGEVVNLLVPFQGK
PRPKVSWMTNGQPVDQTQVNIRNSDTDSILFIRKADRNHSGKYELTVKVENYEDKATIDI
QIVDRPGPPEIVKIKDVWGENVALEWIPPRDNGNAEITGYTIQKADKKTMEWFTVIDHYH
RKSITVSELVIGNEYFFRVFSENMCGLSEEARVTKDSALIVKEGSNYKNPDYQEYDFTEP
PKFTHPLVTTIAVAGYNATLNCSVRANPRPKVIWMKNKIVIDNDPRYRMFSNQGVCTLEI
RKPCPFDGGTYSCKAINDLGEAQVDCKLEVKGGVTFYELLQKGVPLNLISKFLDENKGSE
PQKE
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcccacgaagaaatctgggtctgcttttacaaagaaaccgaaaagtctacaa
gtatgtgctggcagcacagcagaatttacagcagagactgccaaaccagagttcaaggtg
aaatggcaaaaagatggcaaggacatccaagccagtaacaaatatatcattaaacaagat
cagaccctgcacacactgatcatcaatgatgctagcaaggaagacgacgtggtctattct
gtgatcagcgggacgtccaaagtcaaatttgagatgaagattaagggccaagatggaaaa
gatgagaaacctggctctaaaccagaagctgcagaaaataatgaaagtgttcctgcgagt
tcaccatccccagagccagtaggagagctaaaggatgaagcacctgttagtgcccctgaa
aagaaggaagatgaaatcgttactgttataaccccaccacccgctgaagataaagaggat
gatcttgcgacaagctccccatcaccccagcctccgtcagatgacaccagtgatgttcaa
aagcatattgaaattcctaacgatagccttcctgagtcagctaagggaagaaaagactca
gtgtggtctcttggagaagctcccccggatgacattgacaaacccgaggacacgccacgc
tccaccctgttgattgagaagcctcagagtggctcagtgactgttggtggagacattact
ttcatagctaaagttgaagcaaaagacctgcttaggaaacctaccatcaagtggtttaaa
ggtaaatggatggaccttgccagcaaaacagggaagcatctccagctgaaagaaacattt
gaccgtttaacaaaggtgcacacatttgagatgagcattatcaaagccaaggacaactat
gctgggaattatcgttgtgaagtaacttacaaggataagtttgatagctgctcttttgac
ctggaggtaaaagaggttccggaagttttaccttctattgacatccgatcagcctttaaa
agaagcggagaaggacaagacgatgcaggagagcttgactttagtggtctccttaagcat
agagcgaacagggagattaagcaagaggagactgtaccggaggaagatgtgtgggagata
cttaagaacgcaccaccacaagagtttgaaaggatagcttttgaatatggtatcactgac
ttgaggggcatgctgagaagactgaagcgcatgaaacgagaggagaagaagagtgaagcc
ttttccaagaagttggaatctgcttaccaagctgacaaaggagggaaaataaagtttgta
gtagaactggcagaccctacagtggaactgaaatggtataagaatggtcaggagatccgt
cccaccccaaatcagaaaaagtacatttttgagcacaagggcacccagcgcattttggtc
atcaataactgtaccatggcagatgatgcagcgtatcaagtgatggccggggatgagaaa
tgttctacagaactgtttgtaaaagagttaccagttacaattaaaaaggaactggaagct
gtgaaaacgacagttaatgaaagaattgagcttgaatgtgaagtgtcagaagaaggggct
aatgttaaatggtttaagaatggagtggagatccccagagaaattcgctccaggttcagg
tttaagagtgacggcatgaagcacacattggtgattgaggacgccaagaaagaagacact
gcagtctactcagcgatgactacaggagggaagtcggaagcccatgtacaagtagacctt
aaacccctgaagattctgcaggatctgactgaccaaacagtgagactcggaaaatctctc
gtcctgcactgtgaaataaatccagccaacgtacctggaagatggtacaaaaacgcacag
ctaatcccaggcactgatcgtgtgaagatcacccacagaggaagttcacacaaactagaa
atagagaatgcaggagttgatgacatgggggactatacctttgtaccagaggggtattca
gtgagcctgaatggtaaagtccatgtgactgatcctccaaaaattcaccttgatagtctt
aactacccagaaaacactgtgacagttcaagcagggaacaaacttcggctggatattcct
gttacaggacagcctgctccgagggttgtctggatgaaaggcgagagggtgatccttgac
actggtagtagagtacgggctgaatctttcccagatcacagcacatttactatagatgta
gctgaaagggaggacactgggacgtataaaattgtgttgcagaacgaagctggtgaagac
tctgctcagctcaaaataaaggtagtagacatccctgaccctccacaagcacctattgta
actgaggttggtggagactggtgttcaatgatttgggaaaccccattgtatgatggtggt
tcaccaattttaggatatttcattgagagaaagaaaaagcaaagttccagatggatgaga
ctgaattttgatgtttgcaaagagaaggcttttgaaccaaagaagatgatcgaaggcgtg
ccttatgaagttcgtgtttttgcagtgaatgccattggcatttccaaaccaagtgagccc
tcaaaggcatttgtaccacttgctgtaactagtgaaccatcactgctagtagtggacgag
gtcactgactctacagtgacaatgaaatggcgacctccagagcatattggagctgcaggc
ctagatggctatgtcatagagtattgctttgaaggaaaggatgaatggatagtgtccaat
caagagttgactgagaagacgaaatatacaatccatggtctgccaagcggggagaagatc
tttgtcagggttaaagcaataaacgcagcaggcgccagtgcacccagaatgcatccacat
cctattctagtgaaagaagtaattgaacagcccaagattcgtatcccaaggcatcttcat
caaacttacattcggagggttggagaagtagtcaatcttcttgtacctttccagggcaag
ccgaggcccaaggtgagctggatgacgaatggccagcccgtggaccagactcaggttaac
atccgcaacagtgacactgacagcatcctattcatcaggaaagcagataggaatcactcc
gggaaatacgagctgactgtgaaggtggagaactatgaagacaaagctacaatagatata
caaatagttgaccggcctggtccacctgagattgtgaaaattaaggacgtctggggggag
aatgttgcattggaatggattccccccagagacaatggcaatgcagaaatcactgggtac
accattcagaaagcagacaagaagactatggaatggtttactgtaatcgaccattaccac
agaaaaagtattacagtatctgaacttgtcattgggaacgaatactttttccgggtattt
tcagagaacatgtgcggccttagtgaggaagctagagtgactaaggacagcgcactgatt
gtaaaggaaggttcaaattacaagaacccagactaccaggaatatgattttaccgagccc
ccgaaattcacccatcccctagtgaccactatagctgtggcagggtacaacgccacactg
aactgcagtgtccgggctaatcccaggcccaaagtgatatggatgaagaacaagatagtc
atcgacaacgacccccgctacagaatgttcagtaaccagggggtctgcaccctggagatc
cggaagccttgcccctttgatggcggcacgtacagctgcaaagccatcaatgacctgggt
gaggcgcaggtagattgcaaactggaggtgaaagggggggtcactttttatgagctgctg
cagaagggggtgccattaaacctaattagtaagttcctggacgagaacaaaggctctgaa
cctcagaaggagtga
DBGET
integrated database retrieval system
