Polyodon spathula (Mississippi paddlefish): 121318454
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Entry
121318454 CDS
T07273
Name
(RefSeq) caprin-2-like isoform X1
KO
K18744
caprin-2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121318454
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121318454
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
ETX_MTX2
Motif
Other DBs
NCBI-GeneID:
121318454
NCBI-ProteinID:
XP_041111082
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Position
7:complement(26908664..26924814)
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AA seq
977 aa
AA seq
DB search
MVQLSPSPIPCLSPTEQADDGKMTVKAEKKQGSPKSDAQPSLTSLQLALSASTTTYQGYD
TYIEDGLICLKHKIRNIEKKKIKLEDYRQRLKEGELLNQDQLEAVEKYDEVIHNLAFAKE
LQKTFGSLSQELLKAQKKAVRREQVLKIETEKRRLRTILQVQYILQNLQEEHVRKDFRSG
LNGALFLSARELDYLLKFSKLASLMRDEQMSLEDQMEQATSYLWELLEGGEKVVVGTTYK
HLKAQMAKLMDCGYFDHIPVPQSKMLEEVKEVHKVVEVMKTEPLSKLLTEGAKELVKVPE
PSVQIIQTREVQSREFLNRRYLPETDFHSQGKTKTLQPWKADFAATKQEPPDSWEMQFDD
SRTTSPQPVPTKQGRPAAGLVAKAPVESKVTATSPKPKRERKPKDEHEVKPMPKPIHSPI
AVFNSTSSLPKDPALRRQKLQDLMAQIQGSFSFMQDSVLECESSPVSAMPLLTPLSVLAS
STPIAPREPKQKKQALQTGSSTDHSPGTSLNGDRSLSGSEIDLASAAAHETISASPEAVS
FVSPPAIYQTASIPAPLVEKGMDPTRMPLLCEEQMPLCNDTISTPELQTQAFQSPPTSNH
TLSMSAAPFQAMHTVFKVNASLPPRDEPDMKPESYNQSHSTASTQTTPQCSSQPAYTLDQ
NALPHETLQPVTTYQSECPVSNGCQVYMSPGQPNAFPRSNQAYYNNRGAIRGTPRGSRGL
ANSYRSPGGYKAGFDGYRGGIHSPCGNYTQQSYPAREYTTMLYGSREAGYQQNYKRGGGP
AGQKANSRAGWSDSSQVSSPERDHETFNSVDSGQGDSRCITPIDIPVTSQATTLMPVHVY
PLPPQMRVAFSAARTSNFTPGTLDQTISFDLLLNNLGETFEMHMGRFSCPVNGTYVFIFH
MLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAVLQLYQGDQIWLRLHRGAIY
GSSWKYSTFSGYLLYQD
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttccccttcccctataccttgcctttctcctacagaacaggcagatgat
gggaagatgacggtcaaggctgagaagaagcagggaagccccaagtctgatgcccagcct
tccctcacctcactgcagctggctctgtctgcttccaccaccacttaccagggctatgac
acctacatagaggatgggctaatctgccttaaacacaagatcagaaacattgaaaaaaag
aagattaagctggaggactataggcagcgtctgaaggaaggagaacttcttaatcaagat
caactggaggcagtggaaaagtatgatgaagtcattcataatttggcatttgccaaggag
ttgcagaagacatttggttcactgagtcaagaactgttaaaagcccagaagaaggcagtg
cggcgtgagcaggttctgaagattgaaacagagaagcgccgcctgcgcaccatcctccag
gtgcagtacattctgcagaacctgcaggaggagcacgtgaggaaagacttccgcagcggc
ctcaacggggccctctttctctctgccagggagcttgactacctcctgaagttctccaaa
cttgcctccctgatgcgcgatgagcagatgagcctggaggaccagatggagcaggcaaca
agctacctttgggagttacttgaaggaggagaaaaagttgtggttggtactacctataaa
cacctgaaggcacagatggcaaaactgatggactgtgggtactttgaccacattcctgtc
cctcagagtaagatgctggaggaggtgaaagaggttcataaggtagtggaagtgatgaag
acagaaccgctaagcaagctgctgacagagggtgcgaaggagctggtgaaagtaccagaa
ccttctgtgcagattatacagacaagggaagttcagtcaagagagtttcttaacagacgc
tacttgcctgaaacagacttccacagccaaggaaagacaaagaccctgcagccctggaaa
gcagattttgcagccacaaaacaggagcctcctgactcttgggagatgcagtttgatgat
agcagaacgacatccccacagccagtgccaaccaagcaagggagacctgctgctgggctt
gttgcaaaagccccggtggagtctaaagtaacagccacttcaccaaaaccgaaacgtgag
cggaaacccaaagatgaacatgaagttaaaccaatgccaaagccaatacattcccccata
gctgtgttcaattccacttcctcccttccaaaggacccagcactgagaaggcagaagcta
caagatttgatggctcagatccaagggtcattcagttttatgcaggactctgtgctggaa
tgtgagagttcacctgtgagtgccatgcccctgttaacaccgctttctgtgcttgcctca
tccacccccatagcaccaagagaaccaaagcagaaaaaacaagccttgcagactggctct
tcaactgatcacagtcccggcactagcttgaatggagatcgatcactgagtggttctgaa
attgaccttgcttcagcagctgcacatgaaactatttcagcatcgcctgaggcagtgtcc
tttgtttctcctccagcaatatatcaaactgcatcaatcccagcccctttggtagagaag
ggcatggacccgactcggatgcctctgctatgtgaagagcagatgcccctttgcaacgac
acaatatcaacccctgaattacagactcaggcattccaatcacctcccaccagcaaccat
accttaagcatgagtgcagctccctttcaggccatgcatactgtttttaaagtgaatgct
tcattgccgccgagggatgaaccagacatgaaaccagaatcctacaaccagagccattct
acagccagcacccagacaaccccgcagtgttcctcgcagccagcctacacgctcgaccaa
aacgctctccctcatgaaaccctgcagccagtcacaacttatcagtctgaatgtccagtt
agcaatggatgtcaagtttacatgtctccaggacaaccgaatgccttccctcgctcaaac
caagcctactacaataacagaggcgcaataagaggaacaccccgtgggagcagaggcctg
gcaaactcttatcgctcacctggtggatataaagcagggtttgatggttacagaggtgga
attcattctccgtgtggaaactacactcaacaatcctatcctgccagagaatatacaaca
atgctatatggatcaagggaagctgggtatcagcagaactataaacgtggaggagggcct
gctggacagaaagcaaattcaagagcagggtggagtgactcctctcaggtgagcagtcca
gaacgagatcatgaaaccttcaacagtgtggactctggccagggggactcccgctgcatc
acgcctatcgacattccggtcacgagccaggcgaccaccctcatgcctgtgcatgtctac
ccgctccctccacagatgcgtgtggccttctccgctgcccgcacctccaacttcaccccg
ggcaccctggaccagaccatctcctttgacctgctgctcaataacctcggggagaccttt
gaaatgcatatgggccggttctcctgcccggtcaatggcacttacgttttcattttccac
atgctgaagctggcggttaatgtaccgctctacgtgaatctcatgaagaatgaagaggtc
ttggtgtctgcctatgccaatgatggtgcccctgaccatgagactgccagcaaccatgct
gtgcttcagctttaccaaggagaccaaatctggcttcgtctacacagaggtgccatctat
ggaagtagctggaaatattccacattctctggctacctcttgtaccaggactga
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