Polyodon spathula (Mississippi paddlefish): 121318465
Help
Entry
121318465 CDS
T07273
Name
(RefSeq) EF-hand calcium-binding domain-containing protein 6-like
KO
K23851
EF-hand calcium-binding domain-containing protein 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121318465
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121318465
Cilium and associated proteins [BR:
pspa03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
121318465
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
EF-hand domain-containing proteins
Calcium binding proteins
121318465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_11
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
EF-hand_9
DUF5580_M
AIF-1
DUF5580
Rep_fac_C
Peptidase_M26_N
Motif
Other DBs
NCBI-GeneID:
121318465
NCBI-ProteinID:
XP_041111106
LinkDB
All DBs
Position
7:27227743..27256918
Genome browser
AA seq
1550 aa
AA seq
DB search
MKKRRPESEEHCKGHYTQMMMTTVPLTPITVDGLRPHSHGIRIVSRQSTPGRCPSRNASQ
MSRRSATSTGTSVRSTPDPSLSMADIECILQKRTPEKQDDLKRAFQVYDVEYNLTVTKGE
FRSVVESFLLPLTEGQFEELLAKVPMKSNGSIPYMEFLKIFCRLSTVTSRCSSSKANQTK
TLSEILCHIKEKVSKNLKNTVRAFRLFDYNRDGRIQKHEFRRVIESYCFQMNNKEFSKLW
SHFDVSNSGTLSYTEFLQKLGLEINNRPVPEGTQLVLNWEAVREDQKKHHKNMNQLIFVE
GQALDDTERIFQKNMCLNKQNVLKALQAFDDTKSGFVSFEDLKCILSNFVISMNDATFKG
LMNRFGFKATGKIAWEQFLAKFKDCATPGNDQTISVRSNHRVSSIRGADEKFSSGDILLK
LQRHIQTAHTSLRKAFLVFDDGRNGNVTQLELRRILDSLTFRMTNEQFEELMALLDPEDT
GVINYNRFLELFETKESLEGHKWLNRHNETKQIKELPPAILTWETVEGILYNKITDHLRE
IQKDLKCHDPTERGTVSQEALRRILHTYAFPVSDDHFNKLCQSCKDSLTGGVFYRQFLDN
LGIVVQPGDLTGVNTQVFERSHQREEMRRPDLTDRLKEIDGEANHHTKKMTVEELLLKLK
EKMALWDATIRERFLPCCYQPNGKMTKKLFKKVLDDCGLITDDEQFQILTDKLGFKQGEI
SYSDFLMKFEDHRVGSPGAALQHTSNHRVNGTKAHFMSAEQCLIQFVNKLHEDFMDLYCA
FYKADRNRDGIITMHDLRELVDSSMLIINQEEFLRMLGILGLGPSSTLNYPEFFDMFQVK
DMPEAHPWIHSRHRPKLIQPPSEELACEHAHNYLITKVETRWHDMAKACREFDEAGHGII
YKKNLRDILYQFLMPITTKEFDKLWSRYDTKGKGYITHSEFLEKLGVELAPADNGPSFRI
PEENNRTLLEHNTKQQQKHKEIEVMQINQTRALQAAQIEQELKDKFRDNFQDFSKAFIKL
DKNKDGYITVQDFYRVLQEHSYHLSEDQFTHLLDRLGIKTHDSKLAYFDFLRVIDDGRTS
KYGSTQVPVAEVESEIPIYHKALEDIKKKVTASFDNLQKAFAAFDKKKCGALKQEEFRRV
LDSFCFRFSDPLFTYLLSKIKMNKDNTVDWIDFMESYSFLNHKSTNECLEKVQKASKPLT
AKALSMTDILTRIHEVVSSRLETITKEIKDLDYAQIDVISKEDFKKISNRYFMCLTDEQF
ENLWNRMAVNNYGNLEYRKFLKRFSGDPCKKPQSSPVTERHPGSSIKVSPPASAGLLERS
ASLCRRPETAPSVLSRPKSVEQGNRPFTAGGRTTPLLNCESIEQKVKRQVCQSWKKIHKQ
CRERDPEGRGEISVSDFLAVMEKFETNMTPDEFEQLTLKYNIKNNGKFSYPEFLHHFVLT
LKPQDGSLLQRMKIPQPRKAVSPGNRSSQFLDAMLTIQGQVLQCWKPMRRHFKAFDEGVS
GYISVHDFRQVLRKYSVNLSEEDFFHIAAFYDKKLNGKISYNDFLRAFLR
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgaaggccagaaagtgaagaacactgtaaaggccattatacacaaatgatg
atgactactgtaccattaacccccataactgtggatggtctgcgtccccattctcatggg
atcaggattgtttcaagacagtccacccctggaagatgcccatcacgaaatgccagccaa
atgtccagaagatcagctacaagtactgggacctcagttagatctaccccagacccaagc
ctctccatggcagatattgagtgtattcttcagaaaagaacaccagaaaagcaggatgac
ttgaaaagagcattccaggtgtatgatgtagagtacaatctgactgtcactaaaggggag
ttccgtagtgtggtggaaagcttccttctcccacttacagaggggcagtttgaggaacta
ttggccaaggttcctatgaaaagtaatggatccataccttacatggagtttcttaaaata
ttttgcagactttcaactgtgactagcaggtgcagttcaagcaaagctaaccagaccaag
accttatctgaaatcctgtgtcacataaaagaaaaggtgtccaagaacttaaaaaacaca
gtaagggccttccgactctttgattacaaccgggatggacgtattcagaagcatgaattt
aggagagttatcgagagctattgtttccagatgaataataaggaatttagcaagctttgg
tctcattttgatgtgagtaacagtggtacactgtcctacacagaatttctacagaaactt
ggacttgaaatcaacaacaggccagtcccagaaggcacacagttagtgctgaattgggaa
gctgttcgagaagatcaaaagaaacaccataaaaatatgaaccagctgatttttgtcgaa
ggacaagctttagatgatactgagaggattttccagaaaaatatgtgcttaaacaaacag
aatgttctgaaagccttgcaagcttttgatgataccaagagtgggtttgtctcctttgaa
gatctgaagtgcatccttagtaactttgtgatttccatgaatgatgccaccttcaaggga
ctgatgaatcggtttgggttcaaagccactggtaaaattgcatgggaacaatttcttgct
aaattcaaagactgtgcaactcctgggaatgaccagacaatttcagttagatcaaatcac
agggtgagttcaatccgaggtgctgatgaaaagttttcttcaggggatattcttctgaag
ctccaacgacacatccagacagctcacacctctctgaggaaggcctttctcgtgtttgat
gatggccgcaatgggaatgtcactcaattggagttgcgtcggattttggatagtttaaca
tttcgaatgaccaatgaacagtttgaggagcttatggctttgctggatcctgaggacact
ggtgtcatcaactataatcgcttcctggagctgtttgaaacgaaagagtctctggagggc
cacaagtggctgaacagacacaatgaaacaaaacaaatcaaagagctgccccctgcaata
ttgacatgggagactgtggaagggatcttgtacaataaaatcactgaccacttgagagag
attcagaaagatctaaagtgtcacgatcctacagaaagaggaactgtcagccaggaggca
ctcaggagaatcctgcacacatatgcctttcctgtctctgacgaccattttaataaactg
tgccagtcctgtaaagactccctaactggtggagtgttttataggcagtttctggacaac
ttaggcattgtagtgcaaccaggagacctgacaggtgtcaatacacaggtgtttgagaga
agtcaccaaagagaagaaatgagacgacctgatcttactgacaggttaaaagaaattgac
ggggaagcaaatcaccatacgaagaagatgacagtggaggagctcttattgaaactgaaa
gagaagatggccctgtgggatgcaaccatcagggaaaggttcctgccatgttgctaccaa
cctaatggaaaaatgaccaaaaaactttttaagaaggtactggatgactgtggactgatc
acagatgatgaacaattccagattctcaccgataaactaggatttaagcaaggagaaata
tcttactcagattttttgatgaaatttgaagatcacagagtcggcagccccggtgcagca
ctacagcacacctccaatcatcgggttaatggaaccaaggctcactttatgtcagctgaa
cagtgcctcattcaatttgtgaataaactgcatgaagactttatggatctctactgtgct
ttctacaaggctgatcgaaacagagatggaatcatcaccatgcatgacctccgggagctc
gttgatagctccatgttaatcattaaccaggaggagtttctgcgcatgttgggaatactg
ggattgggaccctcctccactttaaactaccccgaattctttgacatgtttcaggtcaag
gacatgccagaggcacatccatggattcattcaagacacaggccaaagctaatccagcct
ccaagtgaagagctagcctgtgagcacgctcacaactacctaattaccaaagtagagacc
agatggcatgatatggcaaaggcttgtcgtgaatttgatgaggctggtcatggcatcatc
tataaaaagaatttgagggatattctatatcaattcctcatgcccatcacaaccaaggaa
tttgacaaactctggtcgagatatgataccaaagggaaaggctacatcactcattctgaa
ttcctcgagaagttaggggtagagctagcccctgcagacaatggccccagctttcggatt
ccagaggaaaacaacagaaccttgttggagcacaataccaaacagcagcagaagcacaag
gagattgaagttatgcagataaaccaaaccagggcactacaagcagcacagattgaacaa
gagctcaaagataaattcagagacaacttccaagatttcagtaaagcctttatcaagttg
gacaaaaacaaggatggctatataacagtacaagatttctacagggtactgcaggaacac
agctatcacttgagtgaagaccagttcacgcatctccttgacaggcttggcatcaagaca
catgatagcaaactggcttatttcgacttcctgagagtgattgatgatggcagaacttcc
aagtatgggtccacacaagtgccagttgctgaagtggaaagtgagatacccatttaccac
aaggctttagaagacatcaagaaaaaagtcacagcttcattcgacaatctgcaaaaggcc
tttgctgcctttgataagaagaagtgcggagcgctcaagcaggaggagttccgaagggtg
ctggacagtttctgtttcaggttctcagacccactgttcacttacctgctgagcaaaata
aaaatgaacaaagacaacacagtggactggattgatttcatggaaagttatagttttcta
aaccacaagagtacaaatgagtgcctggaaaaagtgcagaaggccagcaaacctttaaca
gccaaggccttgtctatgacggacatcctgacccgtatacatgaggtggtctcttcacgc
cttgaaacaatcaccaaggaaatcaaagatcttgactacgcgcaaattgacgtcatttct
aaagaggacttcaagaagatttcaaaccggtattttatgtgtttaacagatgagcagttt
gagaacctctggaatagaatggcagtcaataattacggaaatctagaataccgtaagttt
ctgaagaggttcagtggagatccatgtaaaaagcctcagagctcaccagtaacagaaaga
cacccaggaagttccatcaaagtatctcctcctgcttcagcaggactcctggagaggtcc
gcctctctctgtaggcgcccggaaacagctccctctgtcctcagtcgcccaaagtccgtg
gagcagggaaatcgtccattcacagcagggggacgtacaacaccattgctgaactgcgag
tccattgagcagaaagtgaagagacaagtgtgccagtcctggaagaagatccacaagcaa
tgtagagagagggatcctgaaggacgaggtgaaatcagtgtctctgatttcttagctgta
atggaaaagtttgagacaaatatgactccggatgagtttgaacagctgactttgaagtac
aacattaaaaacaatggcaagttctcctaccctgagtttctccatcattttgtactcaca
ctgaagccacaagatggcagcctgcttcagaggatgaagattcctcagccccgtaaagcg
gtgagtcctgggaatcgaagtagccagtttctggatgccatgcttacaatccaagggcag
gtcctacagtgctggaaaccaatgagacgtcatttcaaagccttcgacgaaggagtgagt
ggctacatctctgtacatgatttccggcaggtactaagaaagtacagtgtgaacctgtca
gaagaagactttttccatattgctgcattctacgacaagaaattgaatggcaaaatatcc
tacaatgatttcttaagagcatttttgagataa
DBGET
integrated database retrieval system
