Polyodon spathula (Mississippi paddlefish): 121318468
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Entry
121318468 CDS
T07273
Name
(RefSeq) sorting and assembly machinery component 50 homolog A
KO
K07277
outer membrane protein insertion porin family
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121318468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121318468
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121318468
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
121318468
Transporters [BR:
pspa02000
]
Other transporters
Pores ion channels [TC:
1
]
121318468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
PAS_9
Motif
Other DBs
NCBI-GeneID:
121318468
NCBI-ProteinID:
XP_041111110
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All DBs
Position
7:27423769..27433436
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AA seq
469 aa
AA seq
DB search
MGTVHARSLDPLPMSGPDFVVHGDDAELIGVEPEAKHEVLENKDVVVQHVHIDGLGRTKD
DLLGYEIAEVFTATNLIDVMKKSHEAREKLMRLGIFRQVEVVIDTSDGEDALSNGVDVTF
EVAELRRLTGSYNTMVGNNEGSMVLGLKLPNVLGRAEKLTFQFSYGTKETSYGLSFFKPQ
PGHFDRNLSINMYKVSGQFPWSSLRETDRGVSTEINFPIWKTSHTLKWEGVWRELGCLAR
TSSFAVREESGHSIKSSISHAMVIDTRNSAILPRQGALLKMNQELAGYTGGDASFLKEDF
EIQLNKRLCWDSVLSTSLWGGLLVPIGDQPSCIADRFYLGGPTSVRGFSMYSIGPQSEGD
YLGGEAFWAGGMHLYTPLPFRPGRGGFGDVFRTHFFLNAGNLCSLNYGEGPRAHLQKLAE
CIRWSYGAGIVLRLGNIAKLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtccacgccaggagcttggatcctcttcccatgagtggacctgattttgtg
gttcacggagatgatgcagaactgataggagtggaacctgaagctaaacatgaagttcta
gaaaataaagacgtggtagtccagcatgttcatatcgacgggctgggcagaacgaaagat
gacctccttgggtatgaaatagctgaggtctttacagctacaaatcttattgatgttatg
aagaagtcccatgaagctcgggagaaactgatgcgcttggggattttcagacaagtagaa
gttgtgattgacacctccgatggagaagatgcattgtctaatggtgtagatgtaacattc
gaagtagctgaattaaggagactaactggaagctacaatacaatggttggcaacaatgaa
gggagtatggttctgggccttaagttgcccaatgtgttaggccgcgcagagaagctcacc
tttcagttctcctatggtaccaaagaaacctcctacggactgtcattcttcaagcctcaa
ccaggacactttgaccgaaatttatccattaacatgtataaagtaagtggacagtttcca
tggagctcacttcgagagactgacagaggagtctccactgaaattaatttccccatttgg
aagaccagtcacaccttaaagtgggagggcgtgtggagagagctgggctgtctggctcgg
acttcatcctttgctgttagagaagaaagtggacattcaatcaaatcctctatctcgcac
gccatggtcattgacacacggaattctgccatcctgcccagacaaggtgccttactgaaa
atgaaccaggagctagcaggctacactggaggtgatgcaagcttcctgaaagaggatttt
gagatccagctaaacaaacgtctttgctgggactcggttctgtcgacatccctttggggt
ggtttgttggtacctattggagaccagccatcctgcattgctgacaggttttatttggga
ggtccaaccagtgtcagaggtttcagcatgtacagcattggacctcagagtgaaggtgac
taccttggtggtgaagctttctgggctggtggcatgcatctctacacacccctccctttc
cgcccaggccgcgggggctttggagatgttttcagaacccacttctttctcaacgcaggg
aatctgtgcagtctcaactatggtgagggtccacgagctcatctccagaaactggcagaa
tgcatccgctggtcctatggtgcaggaatagtactgagactgggcaatatagcaaaactg
gagttaaattattgtattcctatgggagtgcagagtggagacaggatatgtgatggtgtc
cagtttggtgccgggatccggtttctgtga
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