Polyodon spathula (Mississippi paddlefish): 121318475
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Entry
121318475 CDS
T07273
Name
(RefSeq) nuclear transcription factor Y subunit beta isoform X1
KO
K08065
nuclear transcription Y subunit beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121318475
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
121318475
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
TFIID-18kDa
CENP-T_C
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
121318475
NCBI-ProteinID:
XP_041111121
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All DBs
Position
7:27616865..27623786
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AA seq
230 aa
AA seq
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MPSSALGLVPSQPFSVQPNGRFEKMDGDNSTTDASQLGIAGDYIGGSHYVLQSQEDDGDD
GMNDNEDGIGSKDGFREQDIYLPIANVARIMKNAIPPTGKIAKDAKECVQECVSEFISFI
TSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIVTSVTV
TDGLGDELADESFTNQLPAGLITADGQQQNVMVYTTSYQQISGVQQIQFS
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgccaagctcagcgctgggactggttccttcgcagccattttctgtccaaccaaacggc
cgttttgagaagatggatggtgataattcaacaacagatgcctcccagttaggaatcgct
ggtgattatatcggtggaagtcattatgtgctgcagtctcaagaagatgatggagatgat
ggaatgaatgacaatgaagatggcattggcagcaaagatggcttccgtgagcaagatatt
tatcttccaattgccaacgttgcaaggataatgaagaacgccataccccctactgggaag
attgctaaagatgctaaggagtgtgtgcaggagtgtgtgagcgagttcatcagcttcatt
acgtcagaggccagtgagcgatgccaccaggaaaaacgcaaaaccatcaacggggaggat
attctgtttgccatgtccaccctcggctttgacagctatgtggaacccctcaaactgtac
ctgcagaagttcagagaggcaatgaaaggagagaaagggattgtgacgtcagttacagtt
acagatggccttggggacgaattggccgatgagtccttcactaaccagttgcctgctgga
ttgataactgcagatggccagcaacaaaatgtaatggtatatacaacctcatatcaacag
atatccggcgtgcagcagatccagttttcatga
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