Polyodon spathula (Mississippi paddlefish): 121318484
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Entry
121318484 CDS
T07273
Name
(RefSeq) decorin-like
KO
K04660
decorin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04350
TGF-beta signaling pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121318484
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121318484
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pspa00535
]
121318484
Proteoglycans [BR:
pspa00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
121318484
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_9
LRR_14
DUF2685
Motif
Other DBs
NCBI-GeneID:
121318484
NCBI-ProteinID:
XP_041111139
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Position
7:28045895..28065076
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AA seq
364 aa
AA seq
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MKSTILLLLLATVAWAKPFRQTGFLDFMLEDEGSGKPEIDGPKPPIEQPDVPQGPVCPFG
CQCHLRVIQCSDLGLKNVPADIPSDASLLDLQNNKITEIREFDFKNLHILHALILVNNKI
TIIHPKAFTPMGKLQRLYLSKNLLKEMPVNMPKNLQELRIHENEIAKIKKSSFEGMTQVI
VMELGTNPLKSEGIENGAFQDLKKLSYIRISDTNITSIPKGLPSSLSELHLDGNKITKVE
AASLKGLNNLNKLGLSFNQISSVENATLVHVPHLRELHLDNNALVNVPPGLPEHKYIQVI
YLHNNKIAAVGTEDFCPPSYNTKKAMYSGISLFSNPVPYWEVQPITFRCVFDRSAIQLGN
YRKK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgaccatccttctcctgctgttagccacagttgcctgggcaaaaccctttcgc
caaacaggcttcctggatttcatgttggaagatgaggggtctggaaaaccagaaatcgat
gggccaaagccaccaattgagcaaccagatgtgcctcaagggccggtctgtccctttgga
tgccagtgccatctccgagtgatccagtgctcagatttaggtctgaagaatgtgcctgct
gatatcccctcagatgcatctcttctggacttgcagaacaacaaaatcactgaaatcaga
gagtttgacttcaagaacctacatattttacatgctctgatccttgtcaacaacaaaatc
acgatcatacatcccaaagccttcacccccatggggaaactgcagagactctacctgtct
aagaacttactgaaggagatgccagtcaacatgcccaagaacctgcaggagctgcgcatt
catgagaatgaaattgccaaaatcaagaaatcctcattcgaagggatgactcaagtcatt
gtgatggagctgggaacaaacccacttaagagtgaaggaattgaaaatggagccttccaa
gatctgaagaagctgtcctacatccggatttcagacaccaacatcacatccattcctaaa
ggtctccccagctcattgtccgagctccatcttgatggcaacaaaattaccaaagtagaa
gctgccagtctcaagggtctcaacaatctcaacaagcttggtctgagcttcaaccaaatc
agctcagtggaaaatgcaacccttgttcatgtgcctcacttgagagagctgcacctggat
aacaatgctctcgtcaacgtgccacctggcctgcccgagcacaagtacatccaggtcatc
tacctccacaacaacaaaattgctgcagttgggacggaagacttctgtcctccaagctac
aacacaaagaaggccatgtactctggtatcagccttttcagcaaccctgttccatactgg
gaggtccagcctatcaccttccgttgtgtcttcgatcgctctgccattcagcttggaaac
tacaggaaaaaataa
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