Polyodon spathula (Mississippi paddlefish): 121318486
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Entry
121318486 CDS
T07273
Name
(RefSeq) keratocan-like
KO
K08123
keratocan
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pspa00535
]
121318486
Proteoglycans [BR:
pspa00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
121318486
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_6
LRRNT
LRR_5
LRR_14
Motif
Other DBs
NCBI-GeneID:
121318486
NCBI-ProteinID:
XP_041111142
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All DBs
Position
7:28099721..28105004
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AA seq
342 aa
AA seq
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MMTLTSFSLLLLASAIFSQDISYADFLQQVQACPKECKCPPSFPNAVYCDSKGLKEIPQI
PPHTWYLYLQNNLIDTVPETSLKNATQLKWINLNRNKITNKGIDKNVFNKMKNLLYLYME
DNELDDIPAPLPNSLEQLRLSRNKISKIPAGVFNGMVNLIMLDLQNNKIEDGAIPENTFK
ELKNLVQINLAKNSLKKMPSGLPATTMQLFLDNNSIEKIPDNYFSKTPQVSFLRLNYNKL
VDGGLPKNIFNVSTMLDLQLSHNQLTKVPLTHPSLQHLHLNHNKIKSVNGTMICPVPIGT
IDDYFHEKTPNLRYLRLDGNEIRPPIPLDLMMCFRHLQAVVI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatgactcttacaagcttctctcttctgcttctggccagtgcaatcttttctcaggac
atatcatatgctgattttctccagcaagttcaggcatgtccaaaggaatgtaaatgccca
cctagctttccgaacgctgtgtactgcgacagcaaggggctaaaagaaatcccccaaatc
cctccgcacacctggtatctgtacctccagaacaacttgattgacactgtccctgaaacg
tctttgaagaatgctacacagctgaagtggatcaatctgaacagaaacaagataaccaac
aaaggaattgacaagaatgtgtttaacaaaatgaagaatctgctttatctgtatatggaa
gacaatgagttagatgacattccagcgcccttgcctaacagccttgaacaactacgttta
tcaaggaacaagatctcaaaaatacctgcaggggtctttaatggtatggttaacctcatc
atgcttgacctccaaaacaacaaaattgaggatggagccatcccagaaaacaccttcaag
gagctgaaaaaccttgtccagatcaacctggctaaaaatagtctcaagaagatgccttct
ggcctgcctgccaccaccatgcagttatttctggacaacaactccattgagaaaattcct
gacaactacttcagcaaaactccacaagtttccttcctgaggctcaactacaacaaactg
gtggatggaggtctaccaaagaacatctttaatgtctccaccatgctagacctgcagttg
tctcacaaccagctcaccaaggtgcccctcacacatccaagccttcagcatctccacctc
aaccacaacaagatcaaaagtgttaatggaaccatgatctgccctgtgcccattggcact
atcgatgactacttccatgaaaaaacacctaatctccgctacctccgcctcgatggaaat
gaaataagacccccgattcccttggacctgatgatgtgcttcagacatctacaggctgtg
gttatctaa
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