Polyodon spathula (Mississippi paddlefish): 121318537
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Entry
121318537 CDS
T07273
Symbol
ddx11
Name
(RefSeq) ATP-dependent DNA helicase DDX11
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121318537 (ddx11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121318537 (ddx11)
Enzymes [BR:
pspa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121318537 (ddx11)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
121318537 (ddx11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
SelA
Motif
Other DBs
NCBI-GeneID:
121318537
NCBI-ProteinID:
XP_041111240
LinkDB
All DBs
Position
7:complement(32268757..32295204)
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AA seq
925 aa
AA seq
DB search
MGRGSVYNVNKRNLIPEETCRTVRTVFSRMSDASLRFPFPYQPYSIQEQFMESLYSALDQ
GKIGIFESPTGTGKSLSLICGALSWLRDEEERKRQEAAVLLAEPGVSPHKQPSSASRCSP
HSPSEPGWITDFVQKKAKRDLVDKLKEEELRRKRREERLEQIRHNTGLHYAMKRKKSDED
LEAVQLLQRSQEMITSEGGGLEDRDEEELIVAEYESDDDTKKKQNSYDDEDDDLEEEHVT
KIYYCSRTHSQLSQFVHEVQKSPFGKDTRLVSLASRQNLCINEEVRQLGSVQLINERCME
MHKNKQSERKAPEDEEPRKRRGQRKAVCPFSSPAAMQTLRDQALAQVRDIEQLVTLAKQN
RACPYYGGRLAIPAAQLVVLPYQTLLHESTRRASGIKLKDQIVIIDEAHNLIDTITCIHS
ALVTGAQLCCAHSQLTQYMERYRSRLKAKNLMYIKQILYVLESLVRVLGGKVGQNPKTQI
ITEPGTELQSINNFLFKAQIDNINLFKVQRYYEKSMISRKLSGFVEKFQGGTVQPINKEN
RSTAGLERFLQSIRPGAAPEVPSPDQTGGMEDGQPSMASPMMQIEGFLFALTNANKDGRV
VLHRQGSLAQSSLKFLMLNPAVHFSAVLQQCRAVIIAGGTMQPVADFKEQLLLSAGVGPE
RIAVFSCGHVIPPNNILPIILCSGPSGQQLEFTYQKRDTPHMMDETGRILSNLCNVVPGG
VVCFFPSYEYEKRVHAHWEETGLLARLSAKKKIFQEPKKASQVEQVLAEYSRCIQRCSQS
TGPLTGALLFSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLDKTMPRV
GGVSPGKALIENLCMKAVNQSIGRAIRHRGDYASVLLLDQRYSRAGPLSKLPQWIRNSTQ
VQPAFGPAFAALRKFFMEKKTLSRS
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgggtagagggtctgtgtataatgtaaataaaagaaaccttatcccagaagagacgtgc
cgtactgttcggacagtcttttccaggatgtctgacgcttccctccgcttcccgtttcca
taccaaccgtattccatccaggagcagttcatggaatccttgtacagtgctttggatcaa
gggaagattgggatctttgagagcccaactgggacggggaagtctctgagtctgatctgt
ggcgccctgtcctggctgcgggatgaggaggagcgcaagaggcaggaggcggctgtgctg
ctggctgagccaggggtctctccccacaagcagccctcctctgccagccggtgcagcccc
cactcccccagcgagccaggctggatcacagacttcgtgcagaagaaggcaaagagggac
ctggttgacaagctgaaggaggaggagctgaggaggaagaggagagaggagcgcctggag
cagattagacacaacacagggttgcattatgcaatgaaacgcaagaagagcgatgaagac
ttggaggctgtgcagctgctccagcgcagtcaggagatgataacatcagaggggggcggg
ctggaggacagggatgaggaggaacttatcgtggcagagtacgagagcgacgatgacaca
aagaagaagcagaatagctatgatgatgaagacgatgatctggaagaagagcatgtgacc
aagatatattactgtagtcggactcactcccagctctcccagtttgtacacgaggtccag
aagagtccgtttggcaaagacaccagactggtatcactggcatctagacagaatctgtgc
atcaatgaggaggtgcggcagctcggctctgtgcagctcatcaacgagcggtgcatggag
atgcacaagaacaaacagtcagaaaggaaggcccctgaggatgaggagccccggaagcgg
aggggccagaggaaggcagtgtgcccgttctcatcacccgctgcgatgcagaccctccga
gaccaggccctggcgcaggtgcgggacatcgagcagctcgtcacgctggccaagcagaac
agagcctgtccatactacggaggccgccttgccatccctgcagcacagctggtggtgctg
ccctatcaaactctgcttcacgagtcaacgcgccgcgcctcagggatcaaactgaaggac
cagattgtgatcatcgatgaagctcataacctcattgacaccatcacctgcatccacagt
gctctggtcactggtgctcagctctgctgtgctcactctcagctgacccagtacatggag
agatacaggagccgactgaaagccaagaacctgatgtacattaaacagatcctatatgtg
ctggagagcctggtgcgagtgctgggaggcaaagttggacagaaccccaaaacgcagatc
ataacggagccagggacggagctgcagtcgatcaataatttcctgttcaaggcgcagatt
gacaatattaacctgttcaaggttcagcggtattatgagaaaagcatgatcagcaggaag
ctgagtggatttgtagagaagttccaggggggcacagtccagcccatcaacaaggagaac
cgctcgactgcggggcttgagagattcctgcagtccatcagacccggggctgcccccgag
gttccctctccagaccagacaggggggatggaggatgggcagcccagcatggcctctccc
atgatgcagatagaagggttcctcttcgcactgactaacgccaacaaggacgggagagtg
gtgctgcacaggcagggctcgctggctcagagcagcctgaagttcctgatgctgaaccct
gctgtccacttctccgcggtgctccagcagtgcagagccgtgatcatcgcaggagggacc
atgcagccggtggctgatttcaaggagcagttgctgctgtctgcaggggtagggccggag
cgcattgcagtgttctcttgcggacatgtgatcccaccaaacaatattctgcccatcatc
ctgtgcagcggcccctcagggcagcagctggagttcacctatcagaaacgggacactccc
catatgatggacgaaacgggccggatcctgtctaacctgtgcaacgtggtgccgggcggt
gtggtctgcttcttcccctcctacgagtacgagaagcgggtccacgcccactgggaggaa
accgggctcctcgctcgcctctctgccaagaagaagattttccaggagccaaagaaagcc
agccaggtggagcaggtgctggcggagtactcccgatgcatacagcgctgcagccaatcc
accggccccctgacaggagctctgctgttctcagtggttggagggaagatgagtgagggg
atcaacttctcagacgacctgggcaggtgtgttgtcatggtggggatgccataccccaat
ataaagtcccctgagctgcaggaaaagatggcctatctggacaaaaccatgcccagagta
ggaggtgtgagtccagggaaggcactgattgaaaatctctgcatgaaggctgtgaaccag
tccatcggccgagcgatccgtcaccgtggcgactatgctagtgtcctgctcctggaccag
cggtactcccgggccggcccgctctccaagctgccccagtggatccggaacagcacccag
gtgcagcctgcctttggccccgccttcgccgcactccgcaagttcttcatggaaaagaaa
acccttagtagatcgtag
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